Gene Nmar_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0102 
Symbolrpl2p 
ID5773575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp93816 
End bp94550 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content40% 
IMG OID641315722 
Product50S ribosomal protein L2P 
Protein accessionYP_001581440 
Protein GI161527614 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00140338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGGTAAGA GACCATTAGT AAGAAGACGT GGCCGTGGAG GCAATCAATT TAGATCTACT 
TCTACTGGTA AAGTAGGCAC CAAAGCAAAT TATCCTCGTT TTCCGCTATC TGAACAACAT
GAAGGTGAAA TTATTGACCT TGTTCATGAA CGTGGTAGAG AAGCACCTTT AGCTAAAGTA
AGATTTGAAG ATGGTTCCGT ATCGTTTGTT CCAGCAGTTC TTGGAGCAAA AGTTGGTGAA
ACTCTACAAT TTGGATTAAA ATCAAAAATT GAAAAAGGTA ATGTAATTAG TATTCAAAAC
ATTCCTGATG GAACTATTGT ATGTAATATT GAAAAGCACT TTGGTGATGG CGGCGCAATT
GTAAAATCTG CCGGAACTGA TGCAACTGTT TTCTCTCATG GCGATGAAGG TGTTACGGTA
AAACTTCCTT CTGGAAAATT CACTACACTT AACCCAAAAA ACAGAGCTAT GATTGGAACT
CTAGCTGGAG GTGGAGCTAG CGAAAGACCA TTTATGAGTG CTGGTGGCAA ATGGAGAAAC
TTTAAAGCTA AAGGAAAGAA ATATCCGATT GTTAGAGGTG TTGCTCAAGC AGCCTATGTT
CACCCACACG GTGGTGGTCG TCACCAACAT GTTGGACAAA GTTCTACTGT TTCTAGAGAT
ACTCCTCCAG GAGCCAAAGT CGGAAGCATT GCTGCAAGAA AGACTGGTAG AGCTAGAATT
AAAGAAAGAA AGTAG
 
Protein sequence
MGKRPLVRRR GRGGNQFRST STGKVGTKAN YPRFPLSEQH EGEIIDLVHE RGREAPLAKV 
RFEDGSVSFV PAVLGAKVGE TLQFGLKSKI EKGNVISIQN IPDGTIVCNI EKHFGDGGAI
VKSAGTDATV FSHGDEGVTV KLPSGKFTTL NPKNRAMIGT LAGGGASERP FMSAGGKWRN
FKAKGKKYPI VRGVAQAAYV HPHGGGRHQH VGQSSTVSRD TPPGAKVGSI AARKTGRARI
KERK