Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0102 |
Symbol | rpl2p |
ID | 5773575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 93816 |
End bp | 94550 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641315722 |
Product | 50S ribosomal protein L2P |
Protein accession | YP_001581440 |
Protein GI | 161527614 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00140338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGTAAGA GACCATTAGT AAGAAGACGT GGCCGTGGAG GCAATCAATT TAGATCTACT TCTACTGGTA AAGTAGGCAC CAAAGCAAAT TATCCTCGTT TTCCGCTATC TGAACAACAT GAAGGTGAAA TTATTGACCT TGTTCATGAA CGTGGTAGAG AAGCACCTTT AGCTAAAGTA AGATTTGAAG ATGGTTCCGT ATCGTTTGTT CCAGCAGTTC TTGGAGCAAA AGTTGGTGAA ACTCTACAAT TTGGATTAAA ATCAAAAATT GAAAAAGGTA ATGTAATTAG TATTCAAAAC ATTCCTGATG GAACTATTGT ATGTAATATT GAAAAGCACT TTGGTGATGG CGGCGCAATT GTAAAATCTG CCGGAACTGA TGCAACTGTT TTCTCTCATG GCGATGAAGG TGTTACGGTA AAACTTCCTT CTGGAAAATT CACTACACTT AACCCAAAAA ACAGAGCTAT GATTGGAACT CTAGCTGGAG GTGGAGCTAG CGAAAGACCA TTTATGAGTG CTGGTGGCAA ATGGAGAAAC TTTAAAGCTA AAGGAAAGAA ATATCCGATT GTTAGAGGTG TTGCTCAAGC AGCCTATGTT CACCCACACG GTGGTGGTCG TCACCAACAT GTTGGACAAA GTTCTACTGT TTCTAGAGAT ACTCCTCCAG GAGCCAAAGT CGGAAGCATT GCTGCAAGAA AGACTGGTAG AGCTAGAATT AAAGAAAGAA AGTAG
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Protein sequence | MGKRPLVRRR GRGGNQFRST STGKVGTKAN YPRFPLSEQH EGEIIDLVHE RGREAPLAKV RFEDGSVSFV PAVLGAKVGE TLQFGLKSKI EKGNVISIQN IPDGTIVCNI EKHFGDGGAI VKSAGTDATV FSHGDEGVTV KLPSGKFTTL NPKNRAMIGT LAGGGASERP FMSAGGKWRN FKAKGKKYPI VRGVAQAAYV HPHGGGRHQH VGQSSTVSRD TPPGAKVGSI AARKTGRARI KERK
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