| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0101 |
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| Symbol | |
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| ID | 5773598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 91543 |
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| End bp | 93711 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641315721 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001581439 |
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| Protein GI | 161527613 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00292078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAAA ACGCACTTTC TCTCAAAGTT TTAGAGGCAT ACACTAGAGA TGTCGGAAGA
GGAGTAGCAA GAATAGATTA TGATTCTATG GATACATTAA ATGCATCCAC AGGCGATGTT
ATTGAAATTA AAGGTAAAAG AAGAACAGTT GCAAAATGTC TTCCATTATA CCCATCTGAT
GAAGGAAAGG GAATTATCAG AATTGATGGC CTTGGAAGGA ATAATTCAGG AATTGCAATT
GGAGATACAA TTTCAGTTAG GAAAATCAAA GCCGTAGCTG CAGAAAAGGT CGTAGTTGCT
CCATTAGAAG CAATTCCACC AATTGATGAA AGATATCTTG CGGATGCTTT AGAAAGTGTT
CCTTTGATTA AAGGAGACAA TGTAATGGTG CCATACTTTG GTGGACGTTT AACTTTTCAA
GTAATTGGAG TCACACCAGC TGCTGATGCA GTTTTGATCA CCCAAAAGAC AGTTTTCCAT
ATTGCAGAAA AAGGTGAAAC ATTACGTGGA GTTCCACAAG TAACCTATGA AGACATTGGA
GGTTTGACTG ATGAGATAAA GAAAGTAAGA GAAATGATTG AACTCCCATT AAGACATCCT
GAAATTTTTG AAAAACTAGG AATTGAAGCT CCAAAAGGTG TTTTACTTTA TGGTCCACCA
GGAACAGGTA AAACATTACT AGCAAAAGCT GTTGCAAACG AAAGTAATGC ACACTTTATC
AGTATTTCAG GTCCAGAAAT TATGAGTAAG TTTTATGGTG AAAGTGAAGC AAGATTAAGA
GAGATTTTCA AAGAAGCAAG AGAAAAGGCC CCTTCAATAA TCTTTGTTGA TGAAATAGAT
TCTATTGCAC CAAAAAGAGA AGAAGTTACC GGAGAAGTTG AAAGAAGAGT AGTATCTCAG
ATGTTATCAT TAATGGATGG ATTAGAAGCA AGAGGTAAAG TCATTGTAAT TTCTGCAACA
AATAGACCAA ATGCAATTGA TCCTGCACTT AGAAGACCAG GAAGATTTGA TAGAGAGATT
GAGATCAAAG TACCAGATAA AAAAGGAAGA AAAGACATTC TTGCAATTCA CAGCAGAAAC
ATGCCATTAT CTGACGATGT AAACGTGGAT AAAATTTCAG CAATTAGCCA CGGATATGTT
GGTGCAGACT TGGAATACCT CTGTAAAGAG GCTGCAATGA AATGTTTGAG AAGATTATTA
CCAATTCTAA ATCTCGAAGA AGAAAAAATC CCACCTGAGA CTTTGGATAA ATTAATTGTA
AATCATGAAG ATTTCCAAAA AGCCCTAATT GAGGTAACTC CATCTGGAAT GAGAGAAGTT
TTCATTGAAA ATCCAGATGT AAAATGGGAT GAAGTTGGCG GTTTAGAGGA TGTTAAACGT
GAATTACAAG AAGCAGTTGA ATGGCCAATG AAATATCCAG CACTATATGA CAAACTTGGT
CACAGCATGC CAAGAGGAAT ATTGCTTCAC GGTCCTAGTG GTACTGGTAA AACATTACTA
GCAAAAGCTG TTGCAACCCA AAGTGAAGCA AACTTTGTTT CAGTTAGAGG TCCTGAGTTA
TTATCAAAAT GGGTAGGCGA ATCTGAAAGA GGAATTAGAG AAATTTTCAA AAGAGCAAGA
CAATCTGCCC CATGTGTAGT TTTCTTTGAT GAAATTGATT CTATTGCACC AATTAGAGGA
GCAGGTGGAG AAACTGCAGT TACTGAAAGA GTTGTCAGCC AATTACTTAC AGAGTTAGAT
GGAATGGAAA ACATGCATGG AGTTGTTGTT CTAGCTGCAA CAAACAGAGC AGACATGATT
GATCCAGCAT TGTTAAGACC AGGAAGATTT GATAAAATTA TTCAAGTACC AAATCCAGAT
AAAGATAGTA GAAAACGTAT TCTTGAAATT AATGCTGAAA AAATTCCTAT GGGTGATGAT
GTAGATATGG AAAAGATTGC AGAAATTACA GATGGAATGA GTGGTGCAGA TACTTCATCT
ATTGCAAATA CAGCAGTTTC ATTAGTAATT CATGAATTCC TAGACAAACA TCCAGATGTA
AAAGATGTTG AAAAGAGCAG CATAGAAGCC AAAGTAACAA TGAAACACTT TGAAGAAGCA
GTAAAGAAAG TAAGAGAACA AAAAGACCTC AAGATGGGTG AAAAGCTAGT TGCTTCCTAT
TACAGGTAG
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| Protein sequence | MSQNALSLKV LEAYTRDVGR GVARIDYDSM DTLNASTGDV IEIKGKRRTV AKCLPLYPSD
EGKGIIRIDG LGRNNSGIAI GDTISVRKIK AVAAEKVVVA PLEAIPPIDE RYLADALESV
PLIKGDNVMV PYFGGRLTFQ VIGVTPAADA VLITQKTVFH IAEKGETLRG VPQVTYEDIG
GLTDEIKKVR EMIELPLRHP EIFEKLGIEA PKGVLLYGPP GTGKTLLAKA VANESNAHFI
SISGPEIMSK FYGESEARLR EIFKEAREKA PSIIFVDEID SIAPKREEVT GEVERRVVSQ
MLSLMDGLEA RGKVIVISAT NRPNAIDPAL RRPGRFDREI EIKVPDKKGR KDILAIHSRN
MPLSDDVNVD KISAISHGYV GADLEYLCKE AAMKCLRRLL PILNLEEEKI PPETLDKLIV
NHEDFQKALI EVTPSGMREV FIENPDVKWD EVGGLEDVKR ELQEAVEWPM KYPALYDKLG
HSMPRGILLH GPSGTGKTLL AKAVATQSEA NFVSVRGPEL LSKWVGESER GIREIFKRAR
QSAPCVVFFD EIDSIAPIRG AGGETAVTER VVSQLLTELD GMENMHGVVV LAATNRADMI
DPALLRPGRF DKIIQVPNPD KDSRKRILEI NAEKIPMGDD VDMEKIAEIT DGMSGADTSS
IANTAVSLVI HEFLDKHPDV KDVEKSSIEA KVTMKHFEEA VKKVREQKDL KMGEKLVASY
YR
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