| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0100 |
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| Symbol | |
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| ID | 5773637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 90221 |
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| End bp | 91510 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641315720 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_001581438 |
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| Protein GI | 161527612 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00378073 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAT ATAGAGGATA TGAAGGCAAT TCGTTAGAAT TTCTAAAGAG CAATCAAGTA
GTTGTTGGAG ATTCAGTCAA AATCCTCTCA GATATTACAT ATTCAGGCAT AATTATGCCT
CGATATGAGC ATAGTGACGA CAAACACATT GTTCTGAAGT TAAAGAGTGG GTATAATGTG
GGATTAGAAA TTGCAAAAAT TGAGAGTATT GAAAAAATTC AATCATCAGA AAAAAATATT
GATGAACTTG AAAAAATCAG CAAAATAGAC GGATTACCAA AAGTATTGTT ACTTTCAACA
GGAGGTACGA TTGCAAGTAA AGTAGACTAT AGAACAGGAG CAGTTACTCC AGTGCTAACT
GCAGAAGAAT TGAATTCATC AGTTCCAGAG CTTTCTAAAA TTGCAAATAT TGATGCAGAA
GTTTTGTTAT CAGAATATTC TGAAAACATT ATGCCAGAAA ATTGGTTAGA GATAGCTAAT
AAAATTAGTA GTTATTCAAA TTCAGACTAT TCAGGAATTA TCATTGCTCA TGGAACAGAC
ACAATGCATT ATACATCATC ATTTCTTTCA TTTGCACTCG CAGGATTTCC AGTTCCAATT
GTTTTAGTTG GTTCACAAAG ATCATCGGAT AGAGCATCAT CAGATGCAGC ATTAAATCTA
ATTGGTGCCA CTAAATTCAT TACCGAAAGC AAAACAAAAG GAGTGTACAT TGTTATGCAC
AATGATGAAA ATGACAATAC CGTTGCATGT CACATTGGAA CAAGAGTTAG GAAAAATCAT
ACAAGTAAAC GAGGAGCATT TCAAACAGTA GGAGATGATC CTGCTTTCAT AATTGCAGAA
GAAAAAATTC AAAAAAATAT TTCAAAAGAG TTCTATAAAG TTCAAAAATT CCAACCAAAA
ATTAATCTAG ATACAAAAAT TGCATTAGTA AAATACTATC CAGGATATGA TCCAAAATTA
GTTGAACAAA TTATTGACAA CGGATACAAA GGAATAATCT TTGAAGGTAC AGGATTAGGA
CATATTGGAA GGGTCATGTA TGATTCTGTA AAAAAAGCTA GTGAAAAAGG GATATTTCTA
GGCATGACAT CACAGTGTAT TGATGGAAGG GTAAGAATGA CCGTCTATGA AAGTGGCAGA
GATCTTCTAA ATTTAGGCAT AATTCCTTTA GAGAATATGC TTCCAGAAGT TGCTCTAGTA
AAAGCAATGT GGGCATTAGG AAATACTCAG AATATTGAGG AAGTAAAAGA AATTATGCTT
GATAATATTG CATCTGAAAT GTCAATTTAG
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| Protein sequence | MSEYRGYEGN SLEFLKSNQV VVGDSVKILS DITYSGIIMP RYEHSDDKHI VLKLKSGYNV
GLEIAKIESI EKIQSSEKNI DELEKISKID GLPKVLLLST GGTIASKVDY RTGAVTPVLT
AEELNSSVPE LSKIANIDAE VLLSEYSENI MPENWLEIAN KISSYSNSDY SGIIIAHGTD
TMHYTSSFLS FALAGFPVPI VLVGSQRSSD RASSDAALNL IGATKFITES KTKGVYIVMH
NDENDNTVAC HIGTRVRKNH TSKRGAFQTV GDDPAFIIAE EKIQKNISKE FYKVQKFQPK
INLDTKIALV KYYPGYDPKL VEQIIDNGYK GIIFEGTGLG HIGRVMYDSV KKASEKGIFL
GMTSQCIDGR VRMTVYESGR DLLNLGIIPL ENMLPEVALV KAMWALGNTQ NIEEVKEIML
DNIASEMSI
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