| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0099 |
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| Symbol | |
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| ID | 5773602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 88308 |
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| End bp | 90212 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641315719 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001581437 |
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| Protein GI | 161527611 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00583486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAGT TTTCAATAAA CGAATTAGGT GTAAAAGTAG GACTTGAAAT TCATCAGCAA
CTAGCTACAA ATAAAAAATT ATTTTGTAAT TGTACACCAA TTGATACGGA TGAATATTCT
ATTAAATTTC AAAGAAAACT ACGTGCTGCA AAAAGTGAAT TAGGGGAATA TGATCCTGCT
GCATTATTTG AAAAATCAAA ATCAAAAACA ATAATGTATT TTGCAAATCC AGAAAGTAGT
TGTTTAGTTG AACAAGATGA AGAACCACCA CATGAATTAG ATGTTGATGC AAAGAAAATT
TCCCTGGTTA TTGCATCTGC TCTAAAATCA GATGTGTTTA GAGAAATTTA TCCAATGAGA
AAAACAGTTG TGGATGGATC AAATACTACT GGATTTCAAC GTACAATGTT AATTTCGCAA
GGAGGTTCTT TTAATGTTGA AGACAAGGAG ATTGGAATTC AATCTATTTG TCTTGAAGAA
GATGCAGCAA AAATTTTAGG AGAAGATGGG GCAATTAAAA AATATGGATT AGAACGTTTA
GGAATTCCTT TAGTTGAAAT TGCTACTGAA CCATTTGAAG TAAACCCACA TGAAATTAAA
AAAATTGCAT TATCATTAGG GAGAATTTTA AGAAGTACTA AAAAAGTGAA AAGAGGATTA
GGTTCAATCA GACAAGATGT TAATGTTTCA ATTAAAGATG GAAATGCGGT AATTGAGGTT
AAAGGAGTTC AGCAACTCGA TCAATTAGAA AAAGTAGTAG AATATGAGGC TAAAAGACAA
CACGGACTAT TAAAAATCTC AAAAAAATTA CAAGAAATTG ATTGGACTCA TAGTGATAAT
GACAGAAAGG ATGTTACAGA GTTATTCAAA AAATGTAAAT CAAAAATTAT TCAAAATGCC
ATAAAGAAAA ATCAGAAGAT AGTTGGAATT TCTTTTAGAA ACATGTCAGG CATGTTTGGA
TATGCTCCTC ATGAAGGAAT TCGATTAGGA AAAGAGGTAG CAGAACTAGT CAGATTTTTT
GGAATAGGAG GGGTTTTTCA TTCTGATGAA TTACCAAATT ATGGTGTTGA AAATACAGAT
ATTGATGATT TGAAAAAAAC ATTAGAAATC AACGATAATG ATGGATTTTT GGTTTTAGCA
GCACCAGAAG AAAAAATCAA TGTAGTCATA GATCAAATAA TTTTGAGAAT AGAATACATT
CGAAATGAAG GAATTCCAAT AGATACACGA TTAGCAACCC AAAGTGGCGA GACTAAATTT
CTTAGACCAA GACCAGGTGC AGCAAGAATG TATCCAGAAA CAGACATTCC CCCAATAATA
ATTTCAAAAA CAGAATTAGA TAATGCAATA AACAACATTC CAAAGTCATG GGATGATTCA
ATAAAAGATC TTCAAACAGA ATATCAACTC AATCTCCAAT TATCAGAACA ACTCTTTGAT
TCAAACTATT TTGAATTATT TGAAAAGATA ACTGAAAAAA CTAAAGTTAA TCCAACGTTT
GTTGCATCAA TATTATGTTC AACCATTACA AATTTAGAAA GAAATGGATT GGATTCAAAA
TTGTTGAAAA ATGAAGAAAT AACAAAAACA TTTCAATTTT TAGAAGAAGG AAAAATTGCC
AAAGAATCAG TTGAAATTAT TTTTGAGAAC ATTATGAATG GAAAATCCCA TACAATAGAG
AAGGCAATGA ATAACACCTC TATTGAGACT ATAGATGAAT CGGAATTAGA GAGTATTTGT
AAAGAAATTG TTGAAAAGAA TCAAAAAATT GTAGAAAATC AAAAAGAAAG AGCAATTGGA
CCTCTAATGG GAATTGCTAT GAAAGAATTG AGAGGAAAAG CATCGGGCGA AATAATTAAC
AAACTTCTTT TAAAAAATAT CAAAAATAAA TTAGAAAATA ATTAG
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| Protein sequence | MSEFSINELG VKVGLEIHQQ LATNKKLFCN CTPIDTDEYS IKFQRKLRAA KSELGEYDPA
ALFEKSKSKT IMYFANPESS CLVEQDEEPP HELDVDAKKI SLVIASALKS DVFREIYPMR
KTVVDGSNTT GFQRTMLISQ GGSFNVEDKE IGIQSICLEE DAAKILGEDG AIKKYGLERL
GIPLVEIATE PFEVNPHEIK KIALSLGRIL RSTKKVKRGL GSIRQDVNVS IKDGNAVIEV
KGVQQLDQLE KVVEYEAKRQ HGLLKISKKL QEIDWTHSDN DRKDVTELFK KCKSKIIQNA
IKKNQKIVGI SFRNMSGMFG YAPHEGIRLG KEVAELVRFF GIGGVFHSDE LPNYGVENTD
IDDLKKTLEI NDNDGFLVLA APEEKINVVI DQIILRIEYI RNEGIPIDTR LATQSGETKF
LRPRPGAARM YPETDIPPII ISKTELDNAI NNIPKSWDDS IKDLQTEYQL NLQLSEQLFD
SNYFELFEKI TEKTKVNPTF VASILCSTIT NLERNGLDSK LLKNEEITKT FQFLEEGKIA
KESVEIIFEN IMNGKSHTIE KAMNNTSIET IDESELESIC KEIVEKNQKI VENQKERAIG
PLMGIAMKEL RGKASGEIIN KLLLKNIKNK LENN
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