| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0097 |
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| Symbol | |
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| ID | 5773026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 86365 |
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| End bp | 87450 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641315716 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001581435 |
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| Protein GI | 161527609 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00841674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTGCAA AACGAGATTA TTATGAAGTT TTAGGAGTAT CTAAATCGTC TTCAAATGAC
GAAATAAAGA AACAGTATAG AAAATTAGCA TTAAAGTTCC ATCCAGATCG AAATCAATCT
GCTGAGGCTG GAGAACACTT TAAAGAAATT TCTGAAGCAT ATGCAGTTCT TTCTGACACT
GAAAAAAGAC AACTCTATGA TCAACATGGT CATGCAGGTG TAGATGGAAG ATATTCCAGT
GAAGATATCT TCCAAGGCGC AAGAGGTGAT TTTAGCGATA TATTTGGCCG TGGAGGTGGC
GGATTTGATT CCATCTTTGA ATCAATATTT GGCCGTGGAG GTGGCGGATT TGGATTTGGG
CAACAACGCG GTTCTGATAT TCTCTATCAA ACATCAGTAA CATTGGAAGA TGTTTTACAT
GGAAAACAAA TGGAAATTGA ATTACAAAAA CAAATTCAAT GTGATACATG TAATGGTTCA
GGTTGTAAAC CTGGAACTGA CAAGAAAACC TGTTCTTCAT GTAATGGACA GGGCCAAGTA
AGGCAAACAC GTAACATGGG ATTTGCATCA TTTGTTACTG CTGCGCCTTG TTCTTCATGC
AGAGGTCAAG GATCAATTAT TGAAACACCT TGCGGTGATT GTAAAGGTCA AGGAAAAAGA
AAGGGCACAA AAAAAGTTAC ATTTGATATT CCACCTGGAA TTGATTCAGG TGATTATACT
GTATCAAATG AAGGAAACGA AGTACCTGGA GGCTCTAATG GTGATCTAAT TGTTAGAATT
AGAGTACAAC CTCATTCTAA TTTTAACAGA GATGGAAAAG ATATTTTCTA TGATCAAGAT
GTTTCTATGG TTGATGCAGC ATTAGGATGT GAGGTTATTG TTCCAACTTT GGAAGGAACT
GAAAAAGTAA AAGTTGATTC TGGAAGTCAA CCAAATACAA TAATCAAATT AAAAGGAAAA
GGTGTACCAC ACATCAATTC TAGAGGTAGA GGAGATCAGT ATGTTCGAAT TGTAGTAAAT
ATTCCTAAAA AACTCAACAA ACATCAAAAA AATCTACTTG ATGAATTTAA ACAAACTAGT
GATTAA
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| Protein sequence | MSAKRDYYEV LGVSKSSSND EIKKQYRKLA LKFHPDRNQS AEAGEHFKEI SEAYAVLSDT
EKRQLYDQHG HAGVDGRYSS EDIFQGARGD FSDIFGRGGG GFDSIFESIF GRGGGGFGFG
QQRGSDILYQ TSVTLEDVLH GKQMEIELQK QIQCDTCNGS GCKPGTDKKT CSSCNGQGQV
RQTRNMGFAS FVTAAPCSSC RGQGSIIETP CGDCKGQGKR KGTKKVTFDI PPGIDSGDYT
VSNEGNEVPG GSNGDLIVRI RVQPHSNFNR DGKDIFYDQD VSMVDAALGC EVIVPTLEGT
EKVKVDSGSQ PNTIIKLKGK GVPHINSRGR GDQYVRIVVN IPKKLNKHQK NLLDEFKQTS
D
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