Gene Nmar_0096 details

Gene Information

• Locus tag: Nmar_0096
• ID: 5772990
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 84405
• End bp: 86315
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641315715
• Product: chaperone protein DnaK
• Protein accession: YP_001581434
• Protein GI: 161527608
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.0207175
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCAAAG TAATAGGTAT CGATTTAGGA ACAAGTAACT CTGCTGCTGC AGTTATGATG 
GGTGGAAAAC CAACAATTAT TCCTGCAGCA GAAGGTCAAA CTGCAGCTGG AAAGGCATTT 
CCATCAGTAG TTGCTTTTTC TAAAGAAGGA GAACTCTTAG TTGGTGAACC TGCTCGTAGA 
CAAGCAGTTA CAAATCCCGA TAATACAATT ATTGCCGCAA AACGAAAAAT GGGTTCTGAT 
TATACCTTTA AAATTCAAGA TAAAGAATAC AAACCTCAAC AAATCTCTTC ATTCATTCTA 
CAAAAAATAA AAAAAGATGC TGAGGCGTTT GTTGGAGAAA CTGTGGAAAA AGCAGTTATT 
ACGGTTCCAG CATATTTTGA TGACAATCAA CGTCAAGCAA CAAAAGATGC AGGGACAATT 
GCCGGTCTTG ATGTTGTTAG AATAATTAAT GAACCAACTG CAGCATCATT GGCATTTGGA 
TTAGATAAAG CAAAAGAAGA CATGAAAATT CTCGTCTTTG ACTTTGGTGG TGGTACTCTA 
GATGTTACTA TCATGGAAAT GGGTGGTGGT GTTTTTGAAG TAATGAGTAC TTCAGGTGAT 
ACACAACTTG GTGGAACTGA TATGGATAAA GTTTTGATTG ATTACATTGT TGATGAATTC 
AAGAAAAAAG AAGGAGTCGA TCTCTCTCAA GACACAACTG CAATGACAAG AATAAGAGAA 
GCTGCAGAAA AAGCAAAAAT TGAATTATCT ACTGTAATGG AGACTGATGT TAATCTACCA 
TTTATTGCAC ATGATCCATC ATCTGGCGCA AAGAATCTTG AATTAAGATT AACCAGATCC 
AAACTTGATG AATTAATTGG ACCTATTGTA GATCGTTGTA AACCTTCTAT TCAAAAAGCA 
CTTGAAGATG CAAAACTCTC AAATTCTGAT ATTAACAAAA TAGTTATGAT TGGTGGTCCA 
ACAAGAATTC CATTAGTCAA AAAATTTGTT AGTGAAGTTA TAGGCAAAGA AGTTGAATCT 
GGTGTTGATC CTATGGAAGC AGTTGCTATG GGTGCTGCAA TACAGGCAGG AATTATTGCT 
GGTGATGTAA CCAGTGACAT TGTTCTACTT GATGTAACCC CATTAACACT GGGAATTGAA 
ACCCTTGGGG GAGTTAGAGA ACCTCTTATC GAAAGAAATA CTACCATTCC AACATCAAAA 
GGCAAAGTGT TTACAACTGC TGCTGATAAT CAAACAGCTG TTACCATTCA TGTAGTTCAA 
GGAGAAAGAC CTATGGCAAC CGATAATGTA TCATTAGGAA GCTTTAATCT TACTGATTTG 
CCTCCTGCTC CAAGAGGCGT TCCTCAAATT GAAGTAAAAT TCGATATTGA TGCAAACGGA 
ATCATAAATG TAACTGCAAA AGATCTTGGT ACTCAAAAGG AAGCAAAAAT TACTATTGAA 
ACTAAAACTA AACTTTCTGA AGAAGAGATT GAAAAATTAA AAGAAGATGC TGAAAAATTC 
TCTGAAGAAG ATAAAAAGAA GAAAGAAAAA ATTGATCTCA AAAACGAAGC AGAAAGTTAC 
ATTTACACAA CTGAAAAGTT GGTCAATCAT GATCTCAAGG ATAAAATTTC CCAAGAGCAA 
GGAATTAAGA TCACTGATGC TGTAAAAGAA GTCAAAGAAG TTTTAGACAA AGAACCTGAG 
GAATTAAAAC CAAAACTAGA AGCATTACAA TCAATAGTAA ATGAAGTAAC TACCGAACTC 
TACAAGAACG CTGCTCCTCC ACCTGGTGCT GATGGACAAC AAGGTGCTGA TGGACAACAA 
GGTGCTGATG GACAACAAGG TGCTGATGGA CAACAAGGTG CTGATGGACA ACAAGGTGCT 
GATGGACAAA CAACAGAATC ATCTTCAAAT GACGAAACAA AAACTAACTA A 

 

Protein sequence

MGKVIGIDLG TSNSAAAVMM GGKPTIIPAA EGQTAAGKAF PSVVAFSKEG ELLVGEPARR 
QAVTNPDNTI IAAKRKMGSD YTFKIQDKEY KPQQISSFIL QKIKKDAEAF VGETVEKAVI 
TVPAYFDDNQ RQATKDAGTI AGLDVVRIIN EPTAASLAFG LDKAKEDMKI LVFDFGGGTL 
DVTIMEMGGG VFEVMSTSGD TQLGGTDMDK VLIDYIVDEF KKKEGVDLSQ DTTAMTRIRE 
AAEKAKIELS TVMETDVNLP FIAHDPSSGA KNLELRLTRS KLDELIGPIV DRCKPSIQKA 
LEDAKLSNSD INKIVMIGGP TRIPLVKKFV SEVIGKEVES GVDPMEAVAM GAAIQAGIIA 
GDVTSDIVLL DVTPLTLGIE TLGGVREPLI ERNTTIPTSK GKVFTTAADN QTAVTIHVVQ 
GERPMATDNV SLGSFNLTDL PPAPRGVPQI EVKFDIDANG IINVTAKDLG TQKEAKITIE 
TKTKLSEEEI EKLKEDAEKF SEEDKKKKEK IDLKNEAESY IYTTEKLVNH DLKDKISQEQ 
GIKITDAVKE VKEVLDKEPE ELKPKLEALQ SIVNEVTTEL YKNAAPPPGA DGQQGADGQQ 
GADGQQGADG QQGADGQQGA DGQTTESSSN DETKTN