| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0094 |
|---|
| Symbol | |
|---|
| ID | 5773141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 82664 |
|---|
| End bp | 83803 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641315713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001581432 |
|---|
| Protein GI | 161527606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0992132 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGAA CAAAAATTGT TGTTTATGGC CTTAGTACAG AAGGATACGC CATTGCATCA
CAAATGGCCA TTAAAGGAGC AGATGTTTAC ATAATTGACG AATCAACCCC ATCTGCAATT
TCATTAAAAG CAGAGATTGC TAAAACATAT CCTAATGTTT CATCTCTAAA AGAAGATGAG
CCATTATTAG CTATGGAGCC AATTGAAGTA GCAATTTCTA AAGCTCAATA CTTGTTTTTT
ACCCCAAGAA TTAGAAAAAC TGGACAAGAT ATCAAAACTG AAATTCATTC AAAATTCAAG
GACGCTACTG CATCTTTAAA GAAAAAGAGC TCTGTTGTTT TTACTCTTCC TACAGGATTT
GGTGGAAATA ATGAAAACAT TTCTTTACTT GAACATGTTA CAGGATTAGA AGTCGGAAAG
GATATTTCAT ATTTTTATTA TCCTTTGGAA GGTATTGAAC AACAACCAAA AATTATTGGT
TCCTTTAATG GTAAAAAAGA CTCTGTACTA TCTGATTTAC TAACTACCGG AAAAAAAGAG
AAAAACTTTG TTGCGATTTC ATCTTCTGAA CATTTTCATG CAATCAATGT ACTCTCAAGA
TTTTCAAGCT TGTGTAGTGT ATTGGAAGTT TGTAAATATG CTCAAGATGA AATTACTAAA
AATGATCTAT CTTCTGATGA TTTTCAAGAA ATATTCCTTG ATGACATGGT AGGAGGTTTA
CTGGATCTAA AATCTTTAGG CTCATCTTTT GAAGGTGCAA ATACACTCAT GTATCTAATT
AATGGTAGTG TCAAGGGAAT TGATGGTTAC ATCAAACGAT TAATTGATGA AATTCGTGCA
ACATTGAAGA AAAATGATCT TAAAGCTAGT AGAACTAAAA TCGCATTATC TTGGACACTT
GATCAACATT CAATGCGAGG AGATAAAATT GAAATGCTAC AAAATCTAAC TTCTAGATTA
CGTGATTATA TTGGTGATGT AGAAGCATAT GAAGATCCAA ACTTTGATCT ATTTCATAGT
GATAAAACAA CAATTGTTGT GGCTTGCTCA AAATCTGATT TTACAAATAT TGAAAAAACT
AAACAAGATT CTGATTTAAT TATTGTCAAA GCAAACCCTC TATGCGAAAC AATTCAATAA
|
|---|
| Protein sequence | MGGTKIVVYG LSTEGYAIAS QMAIKGADVY IIDESTPSAI SLKAEIAKTY PNVSSLKEDE
PLLAMEPIEV AISKAQYLFF TPRIRKTGQD IKTEIHSKFK DATASLKKKS SVVFTLPTGF
GGNNENISLL EHVTGLEVGK DISYFYYPLE GIEQQPKIIG SFNGKKDSVL SDLLTTGKKE
KNFVAISSSE HFHAINVLSR FSSLCSVLEV CKYAQDEITK NDLSSDDFQE IFLDDMVGGL
LDLKSLGSSF EGANTLMYLI NGSVKGIDGY IKRLIDEIRA TLKKNDLKAS RTKIALSWTL
DQHSMRGDKI EMLQNLTSRL RDYIGDVEAY EDPNFDLFHS DKTTIVVACS KSDFTNIEKT
KQDSDLIIVK ANPLCETIQ
|
|---|
| |