Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0093 |
Symbol | |
ID | 5772949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 81548 |
End bp | 82600 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641315712 |
Product | hypothetical protein |
Protein accession | YP_001581431 |
Protein GI | 161527605 |
COG category | [S] Function unknown |
COG ID | [COG1817] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0978162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAATAT GGATAGATAT TCTAACTCCA AAACAATTAT TGTTTTCTGA ACCAATAATT GAGAAATTAG GTAAAAAAAA CAGGATTTTA TGTACTTCTA GAGATTATGA AGAAGTTTCA AAATTAGCAA AAATTCGTAA TTTTGACCTG ATTTTTGTAG GCAAACATGG TGGAGGAAGT AAAAATTCCA AACTAAAAGC AGGAATTGAG AGAATGGAAA AGCTTACTAG AAAAATTGAA GCATTTTCAC CAGATCTTGT AATTAGTTTT TGCTCACCTG AAGCTGCAAG AATTTCATTC GGATTAGGAA TTAAACACAT AGCATTTTGT GATTCACCAC ACGCAGAGGC AGTGATGAGA TTAACATTAC CATTAATTCA GAAACTTCTA ATCCCTTATA CAATTCCAAA GAAAGAATTT TCAAAATTTG GCATAAATGA AAAAAATATT ATTTCATACA AATCAATTGA CGCGGCGGTC ACAATAAAAA GAAAAACAAA TCAAAGTGTA CGACTTCCAT TTAAAAATAA TCATAAAAAG AATATTTTGA TAAGAATAGA AGAAGAGGAA GCAGCATATA CTAAAAAATC AAATAAAATC ATTCCAATTA TTGAAAATAT AATTTCTCAA TTTAGTGATG AAAATATTGT TATTTTGGGT AGATATACAG AACAAATTCA AAAATTGCAA AAGAAAGTAG GTAAAGACGC TAAAGTTGTA AAAATGTCAT TTGATGGAAA GTATTTGTTA AAGAATACAG ATGTTTTCAT TGGTTCAGGT GGCACTATGA CTGCAGAGTC TGCATTGATG GGAGTTCCTA CAATATCATA TAATGCGGTT CCAAATCTCA TAGAAAATTT TTTGGTGAAA AAACGATTAG TTAAAAGAGA AACAAATCCA AAGAGGGTTT CAAAACAAAT AACAAAGTTT TTTGAATCTA AAAAGCAATT AAATCAACAA AAAGCAAAAA AGATTCTAAA TCAAATGGAA GACCCTATTG ATAAATTAAT TAGAGTATCA GGAATTAGTT TAGTTTTAGG CAAGTTAGAA TAA
|
Protein sequence | MKIWIDILTP KQLLFSEPII EKLGKKNRIL CTSRDYEEVS KLAKIRNFDL IFVGKHGGGS KNSKLKAGIE RMEKLTRKIE AFSPDLVISF CSPEAARISF GLGIKHIAFC DSPHAEAVMR LTLPLIQKLL IPYTIPKKEF SKFGINEKNI ISYKSIDAAV TIKRKTNQSV RLPFKNNHKK NILIRIEEEE AAYTKKSNKI IPIIENIISQ FSDENIVILG RYTEQIQKLQ KKVGKDAKVV KMSFDGKYLL KNTDVFIGSG GTMTAESALM GVPTISYNAV PNLIENFLVK KRLVKRETNP KRVSKQITKF FESKKQLNQQ KAKKILNQME DPIDKLIRVS GISLVLGKLE
|
| |