Gene Nmar_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0093 
Symbol 
ID5772949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp81548 
End bp82600 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content28% 
IMG OID641315712 
Producthypothetical protein 
Protein accessionYP_001581431 
Protein GI161527605 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0978162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATAT GGATAGATAT TCTAACTCCA AAACAATTAT TGTTTTCTGA ACCAATAATT 
GAGAAATTAG GTAAAAAAAA CAGGATTTTA TGTACTTCTA GAGATTATGA AGAAGTTTCA
AAATTAGCAA AAATTCGTAA TTTTGACCTG ATTTTTGTAG GCAAACATGG TGGAGGAAGT
AAAAATTCCA AACTAAAAGC AGGAATTGAG AGAATGGAAA AGCTTACTAG AAAAATTGAA
GCATTTTCAC CAGATCTTGT AATTAGTTTT TGCTCACCTG AAGCTGCAAG AATTTCATTC
GGATTAGGAA TTAAACACAT AGCATTTTGT GATTCACCAC ACGCAGAGGC AGTGATGAGA
TTAACATTAC CATTAATTCA GAAACTTCTA ATCCCTTATA CAATTCCAAA GAAAGAATTT
TCAAAATTTG GCATAAATGA AAAAAATATT ATTTCATACA AATCAATTGA CGCGGCGGTC
ACAATAAAAA GAAAAACAAA TCAAAGTGTA CGACTTCCAT TTAAAAATAA TCATAAAAAG
AATATTTTGA TAAGAATAGA AGAAGAGGAA GCAGCATATA CTAAAAAATC AAATAAAATC
ATTCCAATTA TTGAAAATAT AATTTCTCAA TTTAGTGATG AAAATATTGT TATTTTGGGT
AGATATACAG AACAAATTCA AAAATTGCAA AAGAAAGTAG GTAAAGACGC TAAAGTTGTA
AAAATGTCAT TTGATGGAAA GTATTTGTTA AAGAATACAG ATGTTTTCAT TGGTTCAGGT
GGCACTATGA CTGCAGAGTC TGCATTGATG GGAGTTCCTA CAATATCATA TAATGCGGTT
CCAAATCTCA TAGAAAATTT TTTGGTGAAA AAACGATTAG TTAAAAGAGA AACAAATCCA
AAGAGGGTTT CAAAACAAAT AACAAAGTTT TTTGAATCTA AAAAGCAATT AAATCAACAA
AAAGCAAAAA AGATTCTAAA TCAAATGGAA GACCCTATTG ATAAATTAAT TAGAGTATCA
GGAATTAGTT TAGTTTTAGG CAAGTTAGAA TAA
 
Protein sequence
MKIWIDILTP KQLLFSEPII EKLGKKNRIL CTSRDYEEVS KLAKIRNFDL IFVGKHGGGS 
KNSKLKAGIE RMEKLTRKIE AFSPDLVISF CSPEAARISF GLGIKHIAFC DSPHAEAVMR
LTLPLIQKLL IPYTIPKKEF SKFGINEKNI ISYKSIDAAV TIKRKTNQSV RLPFKNNHKK
NILIRIEEEE AAYTKKSNKI IPIIENIISQ FSDENIVILG RYTEQIQKLQ KKVGKDAKVV
KMSFDGKYLL KNTDVFIGSG GTMTAESALM GVPTISYNAV PNLIENFLVK KRLVKRETNP
KRVSKQITKF FESKKQLNQQ KAKKILNQME DPIDKLIRVS GISLVLGKLE