Gene Nmar_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0092 
Symbol 
ID5774212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp80633 
End bp81373 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content30% 
IMG OID641315710 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_001581430 
Protein GI161527604 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.133912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA TAGTATTAGG CATGGGAGAA GTAGGTGAAA CTCTGTTTGG ATTACTAGAG 
GAAAGAAATT TTGATTGTGT TGGTATTGAC ATAGAATCTT CAAAATGTAA AAATTATTCA
GAAAATGATA CAATCAAAAA TCCAGAATAT CTTCATATTT GTCTTCCAGG TGAACTTACA
GAATTTGTAG ATATTACATT AAGTTGGATT CCAAAATTAA AAGATCTAAA GGCAATAATT
GTACATTCTA CTGTAAGACC AGGTACTACA AAAAACATAC AAGAAAAATC CAGTGTTCCA
GTTTTATTTT CACCAGTTCG GGGTGTTCAT AGAAGATTCT TAGATGACAT CAAAAAATAT
ACAAAATTTA TTGCTTCAGA TAACAATGAA ATCGATCCTG ACATCAAATT AGATTTAGAA
AAAAGATTCC AGAAGGTTGA TTGGATGTCA ACAACAAAGA CAGGTGAACT TGCAAAAATC
TTAGTTGATA CATCGTATTA TGGATGGCTC ATTAATTATG CGCAGATAAC AAAGATGATT
TGTGAAAAGG AAGGAATCGA TTTTGATGAA ATGTGGAAAT TTGCAGATGA AATACATGAG
AATTTAGGAA ATAGACCAAA AATGTATCCA GGAATAATCG GAGGACATTG TGTTATACCA
AATCTTAGTT TAATTGAGTA TGAAAATTTA GACGTAATTA AAAAAATTAA TGAGATGTAT
GAGAACTTTA AGAATAATTA G
 
Protein sequence
MSDIVLGMGE VGETLFGLLE ERNFDCVGID IESSKCKNYS ENDTIKNPEY LHICLPGELT 
EFVDITLSWI PKLKDLKAII VHSTVRPGTT KNIQEKSSVP VLFSPVRGVH RRFLDDIKKY
TKFIASDNNE IDPDIKLDLE KRFQKVDWMS TTKTGELAKI LVDTSYYGWL INYAQITKMI
CEKEGIDFDE MWKFADEIHE NLGNRPKMYP GIIGGHCVIP NLSLIEYENL DVIKKINEMY
ENFKNN