| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0088 |
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| Symbol | |
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| ID | 5772989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 74592 |
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| End bp | 77333 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641315706 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001581426 |
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| Protein GI | 161527600 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.403606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATC CCGTTCTAAC AAAACAGATG AATCCAATTC CTGAATCTCT GTTTGAGAAT
TTTGGTTTTT CCAATCTAAC TGAAATTCAA AAAAAGGCTT CACCAATAAT TTTACAAAAA
AAAGATTGTC TAGTTATTGC TCCTACTGGT TCTGGAAAGA CAGAATGTTC TGTAATACCA
ATATTTTCTT TATTGAAAAA TACTAAAAAG CCTGGAAAAA TAAAAACTCT TTACATTACT
CCATTACGTG CATTAAATCG AGATGTTTTT CGAAGAATTA CAAAATATGC TCATCAAAGT
GAACTTTCTA TTGAAATTAG ACATGGTGAT ACAACACAAA AAGATAGAAA AAAAATTACT
GAAAACCCTC CTGATGTACT AATTACAACT CCTGAAACTT TGGTAATTCT TTTGACTCAA
GTCAAGTATC TTGATGCATT CTCAGAATTA GAGTGGATTG TAGTAGATGA AGTGCACGAG
CTACTGTCTA GTGAAAGAGG TACTCAACTT TCTCTAAGTG TTGAGAGATT GGAATTTAAT
TCCGAATTAC CACTTACAAA AATAGGGTTA TCTGCTACTG TTGGAAATTT TGAAGAGGCA
GGAAAATTTG TTGTTGGTAC TAAAAGAAAA TGTGAGATAA TCAGAGATAC TTCAGTGAGA
AAATATGATG TAGAAGTAAA ATATGTAGAT GGAACAATTT CTGATGTAGC AGAAAAAATT
ATTGAACATG TCTCTAACTT GAATTTGGAT TCCCCTGTTC TTTTGTTTAC AAATACTAGA
GGTGAATCAG AATTTTTAGC CTCAATCCTC AAAGAAAAAT CCATTATTCC AATTGAATTA
CATCATGGTT CTCTTTCAAA AGAAGTTAGA GAAGAAACTG AACAAAATTT ACGTGAAGGA
AAAAGAGGTA TTGTTGTTTG TACATCTTCA CTAGAATTAG GATTGGATAT TGGTTCAGTT
GAATTAGTCA TCCATTATGG TTCACCTAGA CAGGTATCAA AATTAGTTCA AAGAATAGGT
CGAAGTAGAC ATAATCGTAA TGCATCTGCT AAGGGATTAA TCATTACAAA CAACTCTGAT
GATGAATTTG AAGCACAAGC AATTCTTCAA AGAATTCAGG AAGGCTCTAT TGAAGAGCAA
AAAATCCATG ATGGTTCACT TGATGTCTTA GCACATCACT TGGTTGGACT AACAATGCAA
ATTGGAGAAA TCTCAATTGA CAAAGCATTT GATTTGATAA AAAAGGCTTA TCCATTTAGA
AATTTAAAAT TAGAAGAACT TGTAGATGTT TTAGATTTAC TTGATTCAAA TTATTTGATC
TTTTTTGATA GAACAAAGAT GACTTTTTGG AAGAAAGGCC GTTCGTTCAA ATATTATTTT
GAAAATCTTT CTACAATTCC TGATATACTC AAATTCAAAG TTTTTGATAG TGTAGGAAAA
AAAATCATTG GAACACTAGA TCAACGATTT GTAGGTGATT ATGGTGATTC AGGAAATATT
TTTGTGCTCA AGGGCTCACA ATGGAGAATT CTAAATGTTG ACGAGAAATC ATTTACAGTA
AATGTTGAGC CATTTCGAGG TGGAGGAATT ACTGTTCCTT ATTGGGAAGG CGAGAATATC
CCTATTGACT ACAAAACTGC CAGAAAGGTG GGTAATTTTA GAAGTAAAGT GAGAAATGGC
TCATTACAAT TAACAAACAA AACAATTGAA CAACTAAATT TTAATGAAAT TTCTGAAGAA
AATAATGTTG TAGTTGAATC TAATAGATCT CAAGGCTCAA TTGTAATTCA TTCTTGTTTT
GGTACAAAAA TCAATTCCAC TCTTTCAACA TTACTTTCTT CCATGTTATC TTCTATGTTA
GGTTCTGTTG TAGATTCTCG TTCTGATGGA TATAGAATTG TTTTATCTTC TAGATCACGA
ATTTCAGAAA AATTATTTCT TGAGATTCTA AAAGATGATT ATGATTTATT TTCAATGGTT
ACAGCATCTC TTGCTGGTAC TCATAATGTT AATTGGAGAA CTTGGTGTGT TGCAAAAAAA
TTTGGTATTG TAGGTAGAGG TGCAGTCTAT GAAAGAAAGT CTGCTCGATT TTTATATGAA
AGATATGCAA AAACTGCACT TGTACAAGAA GCATTACGTG AATTATTTCA TGATAAATAT
GATCTTAAAA ACACTGACAA ACTTCTAAAA GAAATTCGTG ACGATCAAAT TCATGTAAAA
TGGTTAGAAG TTGATCAATT CTCGAAATTG GCAGAACCAA TCTTGGATCA TACTTCAAAA
TATTATTCTT CTCCTGCAAA TCTTGATAAA GGAATTTTAG ATCTTGTAAA AGCTCGACTT
GAAAAAACAA AACATCGCTT AATCTGTGCT AGATGTGGAA AATGGGAACG TGTAGTTGAA
ACAAATGAAG TAAAAAATAT CTTGATTTGT CCTTATTGTA AAGGGAGACA AATCACTGCG
ACATTTTATT CTGATTATGA TCTTCCTAAA ATTATTCGAA AAAAACATGA AGGCAAAAAA
TTGACTAGTG AAGAAAAACA TAAGGTAGAT CGTGCCTGGA AAGTCTCTTC TCTGGTGGAA
AATTTTGGTA AAATTGCAAT TATTGTCATG TCTGGTTATG GTGTAGGTGC AGACACTGCT
GCACGAATTT TACGAAATAT GGTTGATGAA GAACATTTAT TCAAACAAAT CTATGAAGCA
GAAAGACAGT ATGTAGTTAC TAGAGGCTTT TGGGATTCCT AA
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| Protein sequence | MKDPVLTKQM NPIPESLFEN FGFSNLTEIQ KKASPIILQK KDCLVIAPTG SGKTECSVIP
IFSLLKNTKK PGKIKTLYIT PLRALNRDVF RRITKYAHQS ELSIEIRHGD TTQKDRKKIT
ENPPDVLITT PETLVILLTQ VKYLDAFSEL EWIVVDEVHE LLSSERGTQL SLSVERLEFN
SELPLTKIGL SATVGNFEEA GKFVVGTKRK CEIIRDTSVR KYDVEVKYVD GTISDVAEKI
IEHVSNLNLD SPVLLFTNTR GESEFLASIL KEKSIIPIEL HHGSLSKEVR EETEQNLREG
KRGIVVCTSS LELGLDIGSV ELVIHYGSPR QVSKLVQRIG RSRHNRNASA KGLIITNNSD
DEFEAQAILQ RIQEGSIEEQ KIHDGSLDVL AHHLVGLTMQ IGEISIDKAF DLIKKAYPFR
NLKLEELVDV LDLLDSNYLI FFDRTKMTFW KKGRSFKYYF ENLSTIPDIL KFKVFDSVGK
KIIGTLDQRF VGDYGDSGNI FVLKGSQWRI LNVDEKSFTV NVEPFRGGGI TVPYWEGENI
PIDYKTARKV GNFRSKVRNG SLQLTNKTIE QLNFNEISEE NNVVVESNRS QGSIVIHSCF
GTKINSTLST LLSSMLSSML GSVVDSRSDG YRIVLSSRSR ISEKLFLEIL KDDYDLFSMV
TASLAGTHNV NWRTWCVAKK FGIVGRGAVY ERKSARFLYE RYAKTALVQE ALRELFHDKY
DLKNTDKLLK EIRDDQIHVK WLEVDQFSKL AEPILDHTSK YYSSPANLDK GILDLVKARL
EKTKHRLICA RCGKWERVVE TNEVKNILIC PYCKGRQITA TFYSDYDLPK IIRKKHEGKK
LTSEEKHKVD RAWKVSSLVE NFGKIAIIVM SGYGVGADTA ARILRNMVDE EHLFKQIYEA
ERQYVVTRGF WDS
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