Gene Nmar_0087 details

Gene Information

• Locus tag: Nmar_0087
• ID: 5773803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 73840
• End bp: 74493
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 641315705
• Product: RecA/RadA recombinase-like protein
• Protein accession: YP_001581425
• Protein GI: 161527599
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.439691
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCTCAA CTGGTTTGGA AAAATTAGAC AAATCTCTCT TCGGAGGAAT TCCTAATGGT 
GTAATTGTAG ATATTTTTGG AAAAAATGGA ACAGGAAAAA CCCAACTATT ATTACAATTA 
GCAATAAATT CCATCAAAAA AGGTGGTCAT GTTTTGTATT TTGATACAAC AGGTGGATTT 
AGACCTGAAA GAATTTTGGA TATTCAAAAA GAATCTGAAT CTCAATCAGA TTTTCTTAAT 
CAAATTACAG TTTCACGGTT AACTAATACC TCTGAACAAA TTAATTCAAT AAAAAATATT 
GAAAGGAATT TTTCATTAAT TGTAATTGAT AATATAACTG ATTTATTTTC TTATGAATAC 
CAAAAAGATG AATCTATTTT TGAGAAAAAT TCTTTGTTTA TGAAATACAT GCATGATTTA 
GCTAATTTTG CAATATCAAA TAGAATTCCT ATTGTTGTAA CTAATATGAT AAGAAATCTG 
GAAGGAAAAG AAATTGAAAA TATGAAAAGT GCAATTGATC CATTTACACA CATCAAAATA 
CATCTAACAA AAAATTCATC AAAATTTGAT GGTAAAATTT ATTCTCCGTT TATAGAAAAT 
TCATTTTCTT ACACCATTGA TAAATTAGGA TTGTCTCCTT CTGAAGATAT TTAA 

 

Protein sequence

MISTGLEKLD KSLFGGIPNG VIVDIFGKNG TGKTQLLLQL AINSIKKGGH VLYFDTTGGF 
RPERILDIQK ESESQSDFLN QITVSRLTNT SEQINSIKNI ERNFSLIVID NITDLFSYEY 
QKDESIFEKN SLFMKYMHDL ANFAISNRIP IVVTNMIRNL EGKEIENMKS AIDPFTHIKI 
HLTKNSSKFD GKIYSPFIEN SFSYTIDKLG LSPSEDI