| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0085 |
|---|
| Symbol | |
|---|
| ID | 5773798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 72304 |
|---|
| End bp | 73470 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641315703 |
|---|
| Product | methionine adenosyltransferase |
|---|
| Protein accession | YP_001581423 |
|---|
| Protein GI | 161527597 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.486268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA ATTTTCTGTT TACATCGGAA TCAGTAACAG AAGGACATCC AGACAAAGTT
TGCGATAATA TTTCAGATGC ATTTTTAGAT GAATTTCTCA AACAAGATCC AGATTCAAGA
GTTGCAGTTG AAACAATGGT AACAACTGAT TTTGTTGCAG TCTCAGGAGA AGTTACATCA
AAAGCTAATT TGGATAAAAA AGCACAAGAA GAATTAGTTA GAAAAACCAT TAGAGAGATT
GGATATGACA ATAAAGATTT GATGTTTGAT GCAGATACTT GTCAAGTAAA TTTAAGATTA
CATTCTCAAA GTCCCGATAT TAGTCAAGGT GTTACTGCAA CTGAAGAAAA AGAACAAGGT
GCAGGGGATC AAGGATTAAT GTTCGGATAT GCAACAAATG AAACTCAAGA ATTCATGCCT
ATGCCAATTT TGTTAGCACA TAAACTAATT CAAAAATTAT CTGAAGTAAG AAGAGACAAA
ACACTACCAT GGGTAAGACC AGATGGAAAA TCACAAGTAT CTGTAAGATA TGAAGATAAC
AAACCTACTG GAATTGAAAC CGTAGTAGTC TCTACTCAAC ATGCACCAGA AATTTCTCAA
GAAGAAATCA AAAACGAAAT CATTGATAAA GTTATCAAGC CAGTACTAGG AGATCTATGG
AATGATAATA TCAAAATTCA CATTAATCCA ACTGGAAAAT TTGTGATTGG AGGGCCACAT
GGAGATGCAG GTCTTACTGG AAGAAAAATT ATTGTAGATA CCTATGGTGG TTTTGGAAGA
CATGGTGGGG GCGCTTTCTC TGGTAAAGAC CCTTCAAAAG TAGACAGATC AGCTTGTTAC
ATGTGTAGAT ATATTGCAAA GAATTTGGTT GCAGCAGGTC TTGCAGATAG ATGTGAAGTT
CAACTTGCAT ATGCAATTGG AGTTGCAGAA CCAGTATCAT TATACGTAAA CACTTTTGGA
ACAAACAAAA TTCCGGAAAA TCAAATTGAA GATTTAGTCA GAAAGAATTT TGATATGAAA
CCATCAGGAA TTGTTTCTCA ACTAGATCTG AAAAGACCAA TTTACAAAAA AACAGCATCA
TATGGTCATT TCGGAAGAAA TGAGCCAGAA TTTGGCTGGG AAAAAACAAA CAAAGTAGAT
GCACTAAAGC AAGGCGCCGG TCTTTAA
|
|---|
| Protein sequence | MTNNFLFTSE SVTEGHPDKV CDNISDAFLD EFLKQDPDSR VAVETMVTTD FVAVSGEVTS
KANLDKKAQE ELVRKTIREI GYDNKDLMFD ADTCQVNLRL HSQSPDISQG VTATEEKEQG
AGDQGLMFGY ATNETQEFMP MPILLAHKLI QKLSEVRRDK TLPWVRPDGK SQVSVRYEDN
KPTGIETVVV STQHAPEISQ EEIKNEIIDK VIKPVLGDLW NDNIKIHINP TGKFVIGGPH
GDAGLTGRKI IVDTYGGFGR HGGGAFSGKD PSKVDRSACY MCRYIAKNLV AAGLADRCEV
QLAYAIGVAE PVSLYVNTFG TNKIPENQIE DLVRKNFDMK PSGIVSQLDL KRPIYKKTAS
YGHFGRNEPE FGWEKTNKVD ALKQGAGL
|
|---|
| |