Gene Nmar_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0083 
Symbol 
ID5774240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp70282 
End bp71367 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content34% 
IMG OID641315701 
Productcobalamin biosynthesis protein CbiD 
Protein accessionYP_001581421 
Protein GI161527595 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.25516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAG AGAAAAAACT CAGAACAGGG TACACAACAG GGAGTTCTGC CACTGCAGCA 
TCAAAAGCGG CTTTATTATC AATTATCAAA CAACAAAAAA TTGAAGAGGT TGAAATTACC 
TTACCTAAGA AAACCACCAT TAAGATTCCT GTAAATTCAT GTGAATTTGA AAAAAACAAA 
GCAAAATGCT CTGTAATAAA AGATGGGGGA GACGATCCCG ATGTCACACA TGGTGCTGAA 
ATTATAGTTG AATTAACATT TAATGAAAAC AAAAAGCAAA TTGAAATTGA TGGGGGAGAA 
GGAGTAGGCA TAGTTACTAA ACCTGGTTTA GGTTTAGAAA TTAACAAACC AGCCATAAAT 
CCTGTTCCAA AAAAAATGAT TACAGAAAAT CTTCAAGAAA TAGGCAGCGA TATTCTGCAT 
AAAAAAGGAA TTAGAGTTGA AATATCAGTT CCAAAAGGTA AAGAATTAGG ACCTAAAACG 
GATAATCCTA GAATAGGCAT CAAAGAAGGA ATTTCAATTT TAGGTACAAG TGGAATAGTA 
ATCCCATTTT CAACTGCATC ATATGCAGCA TCCATTAGAC AAAACTTGGA TGTATCAATT 
GCTATGGGAA ATGATACAGT AGTATTAACA ACTGGAGGAA GAAGTGAAGA CTTTGCAAAA 
AAGATCGTAG ATCTTCCAGA ACATTGTTTT GTACAAATGG GGGATTTTTC AGGTTACACA 
ATTCAACAAT GCGGTAGGAA AAATATCAAA AAGGCATACG TGGTTGGATT TATTGGAAAA 
CTGGCAAAGA TGGCAGCAGG AGTAAAACAA ACTCATGTTA AAGGTTCCAA AGTTGATATG 
AACTTTCTAG CAGAATTGGC AAGAAAAGTC AACGCAGATA AAAAAATTAT TGATGATATT 
AAAAAAGCGA ATACTGCAAG ACATGTTTCA GAAATTATAC AAGAAAATAA TGTGAGTGGA 
TTTTTTGAGT TAATTTGCGC TGAAGTGTAT AAACATATGA GAAAGCACAG TGAAGAAAAA 
GTTCCGATTG ATGTCATATT ATTTGATTTT GAGGGAAACA TTTTGGCAAG AGAACCAAAA 
GGGTAA
 
Protein sequence
MAEEKKLRTG YTTGSSATAA SKAALLSIIK QQKIEEVEIT LPKKTTIKIP VNSCEFEKNK 
AKCSVIKDGG DDPDVTHGAE IIVELTFNEN KKQIEIDGGE GVGIVTKPGL GLEINKPAIN 
PVPKKMITEN LQEIGSDILH KKGIRVEISV PKGKELGPKT DNPRIGIKEG ISILGTSGIV 
IPFSTASYAA SIRQNLDVSI AMGNDTVVLT TGGRSEDFAK KIVDLPEHCF VQMGDFSGYT 
IQQCGRKNIK KAYVVGFIGK LAKMAAGVKQ THVKGSKVDM NFLAELARKV NADKKIIDDI 
KKANTARHVS EIIQENNVSG FFELICAEVY KHMRKHSEEK VPIDVILFDF EGNILAREPK 
G