Gene Nmar_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0082 
Symbol 
ID5772933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp69198 
End bp70250 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content32% 
IMG OID641315700 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_001581420 
Protein GI161527594 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.243954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TTTCAGTTCT TTCTATTACT AAAAATGGTA TAAAGATTGG TCAAACTCTA 
AAAGAATTTT TTCCAGAATG GAGCATTTTT GCACCTGATA AATTTTCTAA TCAAAATGAC
TCAATCACAT GGTATTCAGA GCCCACATCA GAGAAAATTG TTGAACTTTT CAAAAATAAT
GATGCAATAA TATGCTTATT TTCTCTAGGT GCAGTGATTC GATTAATAGC ACCTCATCTA
AAAGACAAGA AAACAGATCC TGCTGTAATT GTGATTGATG ATAAAACAAA TTTTGTAATT
AGTGTATTAT CTGGACATAT TGGTGGTGCA AATGAACTTA CTGAAAAAAT TGCAGAAAAA
TTACAAGCAC AACCAGTAAT CACTACAGCT GCTGACGTAA ACAAAACTAT TGCTGTTGAT
TTGGTCGGAA GAGACTTTGG TTGGAAGATT GATGATGACT CTAATGTTAC TAGAATTAGT
GCACACATGG TAAATGAAGA ACCAATAGGA GTTTTTCAAG AAACAGGTGA AAAAAATTGG
TATAAACAAT TACCAAAAAA TGTTTCACTA TACAACACTA TAAACGAATT AAAAAATTCA
AAATCAAAAG CAAATTTAAT AATTTCAGAT AAAATCATTG ACGATGATCT AGCATCTGAA
TCAGTTGTTT ACAGACCACT AAGTTTAGTA ATTGGAATAG GTTTGCATTG GGATACATCA
AAAGAAACTA TCAAAGAAGG AATTAATGAT TGTCTTGATA AATTTAAACT CAGTCCAAAA
TCAATAGCAA AACTAGTTTC TATAAAAAAA CCTGAAGATG TACAAGGATT AATTGATGCT
GGAAAAGAGA TGGGAGTTCC AGTCGAATAT GTAAATAGAG AAGATTTGGC TAAAGTTACA
GCCCCTAATC CTTCAGATAC TGTAAAAGCA TTTGAAGGAA CAGCCAGTGT TTCAGAGGCT
GCAGCAATTC TAGTGTCAAA TGGCAAATTA ATTGTAGAAA AGCAGAAATT CCCACCAAAT
TTGACTATAG CAATAGCGAG GATTGAGAAT TGA
 
Protein sequence
MEKISVLSIT KNGIKIGQTL KEFFPEWSIF APDKFSNQND SITWYSEPTS EKIVELFKNN 
DAIICLFSLG AVIRLIAPHL KDKKTDPAVI VIDDKTNFVI SVLSGHIGGA NELTEKIAEK
LQAQPVITTA ADVNKTIAVD LVGRDFGWKI DDDSNVTRIS AHMVNEEPIG VFQETGEKNW
YKQLPKNVSL YNTINELKNS KSKANLIISD KIIDDDLASE SVVYRPLSLV IGIGLHWDTS
KETIKEGIND CLDKFKLSPK SIAKLVSIKK PEDVQGLIDA GKEMGVPVEY VNREDLAKVT
APNPSDTVKA FEGTASVSEA AAILVSNGKL IVEKQKFPPN LTIAIARIEN