Gene Nmar_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0080 
Symbol 
ID5773425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp67818 
End bp68459 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID641315698 
Productprecorrin-8X methylmutase CbiC/CobH 
Protein accessionYP_001581418 
Protein GI161527592 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.52758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTG AAAAAGGTCA ATCAATTGAA GATGCAAGCA TGCAAATGAT TGAAGATGAA 
ATTGGTTCTC ATCCATACAA TGAAAAGGAA TGGCCAATTG TAAGAAGAAT TATTCATTCT 
ACAGCAGATT TTGATTTTGC AGATAAAAAT AAAATAATTT TTCATAAGGA AGCAATTGAA 
AGCGGAATGA AAGCTTTGAA GAATGGTTGC AGTATCGTAG TAGATGTCAA CGGGGTAATT 
GGAGGCCTCA ATAAACAAAA TCCAAAAGAT TTTGGAAATG ATATTGTTTG TAATATCTCA 
AAACCCGAAA TTATGGAATT GGCAAAAAAA GAGGGAAAAA CACGCTCTCA GGTATCCATG 
AGGGCTGCAA AATCAGATAT TGATGAAGGA ATTGTAGCAA TAGGAAATGC GCCTACAGCC 
TTACAAGAGG TGATAAAGAT GGTAAAAGAA GGAATTGTCA AGCCTGCACT AATCATAGGT 
ATTCCAGTAG GCTTTATCTG CGCTGCAGAA TCAAAAGAAG AATTATCTAG ATTAGAAGAG 
GCGCCATTTA TCACAAATTT GGGTAGAAAA GGAGGTAGTT CCTCAGCTTC AGCAATAATA 
AATGCAATTT TCAAGTTAAT TCGAGCAGAA TCAGCTTCTT GA
 
Protein sequence
MQTEKGQSIE DASMQMIEDE IGSHPYNEKE WPIVRRIIHS TADFDFADKN KIIFHKEAIE 
SGMKALKNGC SIVVDVNGVI GGLNKQNPKD FGNDIVCNIS KPEIMELAKK EGKTRSQVSM 
RAAKSDIDEG IVAIGNAPTA LQEVIKMVKE GIVKPALIIG IPVGFICAAE SKEELSRLEE 
APFITNLGRK GGSSSASAII NAIFKLIRAE SAS