Gene Nmar_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0075 
Symbol 
ID5773906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp62723 
End bp64861 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content32% 
IMG OID641315693 
Productdolichyl-diphosphooligosaccharide--protein glycotransferase 
Protein accessionYP_001581413 
Protein GI161527587 
COG category[R] General function prediction only 
COG ID[COG1287] Uncharacterized membrane protein, required for N-linked glycosylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.70229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTCTG ATTCTACTCT AATTTCTGTT GGACAATTTG ATTTAAAATT AAATCATCTC 
TTAGTGATTG GTATTCTTTC ATTATCTTTT TCAATCTCTT TTTTAGTCCG TGCCCAACCT
GCAGAATGGG GTTGGGAATT ACATGAATTT GATCCTTTTT TCAATTATCG TGCTACTGAA
TATTTAGTCA ACAATGGAGT TGATGCATAT TTTGAATGGA ATGATGAATT AAGTTGGTAT
CCTTGGGGTA GAGACGTATC TGAAAGCTCA CAAGTTGCAT TACATCTTAC TGCTGCAGTA
ACTTATTGGA TGTTTGGTGG TGGAGGAAAT CTCTATGATT TTACCATACT TTTCCCAGCA
ATTTTTGGTT CTTTGACAAC TATTGTTATA TTCGCACTAG TACGTGTAAT TGGCGGAACT
ACTGCAGGAT TATTGTCTGC ATTATTATTT TCAGTATCTA TTCCAATGTT AACAAGAGGT
GCTATTGGTT GGTTTAAATC TGAACCACTT GGTTTGTTCT TTGCAATTTT ATCAATGTAC
CTTCTTTTAA GCGGTATTAA TTCAAAAAAT CAAAAAATTG TTATACCTAA ACTTGTTTTT
AGTGGATTTT TTATTATAAT GAGTTTGTCT GCCTGGGGTG GAAACCAATT TTTCATAATC
CCACTAGCTA TCTTTTTCTT AACTCTACCT TTCTTACGAA AAGATCATAA ATTTCTGATT
TGGGCAATTC CAATTTTTAG TTTATCTACA ATTATAACAT CTTTGGGTTT TGAAAGAATT
ACATCAAATT TTCTAATAGG TTTAGGTGGG TTTGCATTAT TTGTTCCAAC AATTTTTCTT
GTATTGTGTA TAATTATTCA AAATAAAAGT AATGATAAAC ACAAAATGCG TAATGGTTTG
ATCTTCCTTG CATCTTTTCT TATTATCATT TCAGCATTTC TTCTAATAAA TACCTCAGAA
GAATTCATAC CCTTGCCGTC TCATAGATAT CTTAATGCAA TAAATCCATT TTTAACTACT
GATAATGCAC TAACTGATTC AGTATCCGAA CATGCTACAC CTACAATACA TCATTCTTTC
TTATTCCATT CTGTCATCAT GGTTTTTGCT GGTATTGGAA TATGGTTGAT GTTAAGTAAC
TCTAAAAACC ATTTTGTTAT CCGAAATGAC ATGAAATCAT TTTCGTTACT TGTAGGAATA
ACTGGAGTTT ATGCTGCTTC AACATTTTTG AGATTAGAAG TATTTGCATC TGTATCTGTT
ATTATCCTTG CATCCTTGGG AATATCATTT TTATCTAAAT CATTATTTTC GAACAAAATG
AAGTTTTCTA ATCTAAAAAA TCTAGTATTA ACACTGTCGT TTGGAATTGG TTTAATAACA
TTATTGGTAA TTCCTATAAC TTTTGTTGCT CCTCTAAATG TATTTCAAGT AGGTGACAAT
CCATTTACTA TACTTAATGG TGGTACTACT TTTGGGTTAG CCAATAATGA TTGGAATGAT
TCTTTAGAAT GGATAAAAAA TAATACTCCT GAGAATTCTG TTGTTGCTGC ATGGTGGGAT
TATGGATATT GGATTCAAAC TAAGGCAGAA AGAACAACAC TAGCTGATAA CTCTACTTTG
ATTGATCATG TAATTGAAAA AATTGCCAAA GTTTTCTTAA GCACTCCTGA ACAGGGCTGG
AAAACTTTGC AAGAAATGGA AGCAGATTAT ATTGTTATTT TTATAGCTGG GCAAAGACTA
AACTTGGATG GAAATGAAAA CCAACCAGTC TATATTTTAA GCGGTGGTGG AGATGAATCT
AAAAAACAAT GGTTCATGAG TATAGCTGGA GAGCCACTTG AAAAATATCT GCAATCAGAT
GGAATAAGTG GAACTGATCA TTTCTGGAAT AATACTACAT TAGGAAAGAT GATTCCATTT
GAATTACTTG GTTATGTTAA TTTTGAAACA AACCAACAAT CTTTATCATA TCAACCTGGT
TTTACTGCAA TTTATGAAAA GAACATTAAA TTTTCTATGG ATGATAATGG TCCATTAAAA
CTAGTTTATT CATCTCCAAG CTATGATACC CCTAGAGGCG GGGCTCTGAC TGGAATTTTT
GTTTATGAAA TCAATAAGGA TTACATACCA ACAAACTAA
 
Protein sequence
MNSDSTLISV GQFDLKLNHL LVIGILSLSF SISFLVRAQP AEWGWELHEF DPFFNYRATE 
YLVNNGVDAY FEWNDELSWY PWGRDVSESS QVALHLTAAV TYWMFGGGGN LYDFTILFPA
IFGSLTTIVI FALVRVIGGT TAGLLSALLF SVSIPMLTRG AIGWFKSEPL GLFFAILSMY
LLLSGINSKN QKIVIPKLVF SGFFIIMSLS AWGGNQFFII PLAIFFLTLP FLRKDHKFLI
WAIPIFSLST IITSLGFERI TSNFLIGLGG FALFVPTIFL VLCIIIQNKS NDKHKMRNGL
IFLASFLIII SAFLLINTSE EFIPLPSHRY LNAINPFLTT DNALTDSVSE HATPTIHHSF
LFHSVIMVFA GIGIWLMLSN SKNHFVIRND MKSFSLLVGI TGVYAASTFL RLEVFASVSV
IILASLGISF LSKSLFSNKM KFSNLKNLVL TLSFGIGLIT LLVIPITFVA PLNVFQVGDN
PFTILNGGTT FGLANNDWND SLEWIKNNTP ENSVVAAWWD YGYWIQTKAE RTTLADNSTL
IDHVIEKIAK VFLSTPEQGW KTLQEMEADY IVIFIAGQRL NLDGNENQPV YILSGGGDES
KKQWFMSIAG EPLEKYLQSD GISGTDHFWN NTTLGKMIPF ELLGYVNFET NQQSLSYQPG
FTAIYEKNIK FSMDDNGPLK LVYSSPSYDT PRGGALTGIF VYEINKDYIP TN