| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0068 |
|---|
| Symbol | |
|---|
| ID | 5773033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 58063 |
|---|
| End bp | 58605 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 641315685 |
|---|
| Product | class I glutamine amidotransferase |
|---|
| Protein accession | YP_001581406 |
|---|
| Protein GI | 161527580 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.919484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCTAA TTGTAGATAA TGGTTCTATT TACACAAAAA ATCTAACTGA TTTTCTTACT
AGAAAAAATA TTCCATTTGA AACTAAGACA CCATTTACTA TAGATATCAA TTCATTATCT
AATTATGATT CTTTTATTTT ATCTGGAAGA AGAAAAAACG AAAAAAAGAT TAATGAAATA
AATTCCAAAA TTGTAAATTA TTCTATGCAA AATAATTCTA AACTACTCGG TATATGTTAT
GGTGCAGAAA TCTTAGCTCT TACTTTAGGA GGAACCATCA AAAAAAGCTC ATCTTTTCAG
AAAGGAAATG AAACTGTAAA GATATTTGAG AATGATCTAA CAAATAATGA TTCTTTATTG
GTTTTTGAGA GTCATAATTT TGAGATATCA AAGTTGCCTA AAGAACTAGT TTCTATTGGA
GAATCTTCTA ATTGTAAATA TGAAATTATC AAACATGTAA ACAAGCCTAT TTTTGGAACT
CAATTTCATC CTGAAATGAG TCTAGATGGA AATAATCTGA TTGAACAGTT CTGTCTACTC
TGA
|
|---|
| Protein sequence | MLLIVDNGSI YTKNLTDFLT RKNIPFETKT PFTIDINSLS NYDSFILSGR RKNEKKINEI
NSKIVNYSMQ NNSKLLGICY GAEILALTLG GTIKKSSSFQ KGNETVKIFE NDLTNNDSLL
VFESHNFEIS KLPKELVSIG ESSNCKYEII KHVNKPIFGT QFHPEMSLDG NNLIEQFCLL
|
|---|
| |