| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0066 |
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| Symbol | |
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| ID | 5772942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 54038 |
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| End bp | 55159 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 641315683 |
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| Product | DNA primase small subunit |
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| Protein accession | YP_001581404 |
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| Protein GI | 161527578 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
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| TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAA CTGATATAAA ATTTCTAGAA AGTGCGTTCA AAAAATATTA TTTTGAACAA
TTCGAATTGA TTAGAGTACC AGAACGTACA TCTGAAAGAG AATTTGGTTA TCAAAAATTC
AACTCAGGAA TGACACGTCA TATTTCAGTC AAAGATGACA AAGAACTGCA TTTACTACTA
ATGCAAAACG TTCCATCTGA TGTCTATTGT TCAAATGCAT ACTATTCATT TCCAAATTTA
CCTATGAATG AGAAAGATTG GAAGGAAGCT GATCTTATTT TTGATATTGA TGCAAAGGAT
CTTAATCTAT CGTGTAGAGG AAATCATACT TTATCAATAT GCAATGAATG TCATGAAATT
TCAAATAATT CTGAAAAATG TTCAAAATGT AACTCTACAA AATTAGAAAA AAAATCTTTG
CCATGTAAGA ATTGTATAGA CTCTTCAAAA ATTGAAGTTA AAAAATTATC AGAAATTCTA
ACAAATGATC TTTCAGTAAA CAAAGATGAT ATTCAAGTAT ATTTTTCTGG GAATGAAGGA
TTTCATATCT ATGTTTATAA TTCACAATTT CAACAAAATG GTTCTAGAGA AAGATCAGAG
CTTGTAGATT ACATTATGTT TAATGGTGCA ATCCCTGAAA AATTTGGAAT GAAAAAATTT
AAGCCAAATA GAAATTCTTT TCCAGATTTT GATGAAGCTG GATGGAAAGG ACGATTTTCA
AAATATGTTT ATGGGTCAAA ATCAAAAAGA TCAAAGATCG TCTCAGAATT ACTTTCAAAT
GGTTATTCAT CATTCCAAAA AACTTTGGAT GATGTTTCTG AAAATATTGG TACAAAAATT
GATCCAAATG TTACAATGGA TATTCATAGA ATCTTTCGTT TACCAGGCTC TATCAATAGT
AAAAGCGGTC TTACAAAAAT TCATTGTAAA GACTTGGTAA AATTTGATGC TTATGTCGAT
TCATCTTTTC TTAGTGATGA TAGTGTTGAA GTCTTAGCAA ATTGTCCAAT TGAGTTTAAA
TTAAAAAATA AAAAATTTGG GCCATATCAT AACGAAAAAG TAAGTGTTCC TACATTTGCT
GCAGTCTATA TGGTATGCAA AAAACTAGCA ACAATAGCCT AA
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| Protein sequence | MNETDIKFLE SAFKKYYFEQ FELIRVPERT SEREFGYQKF NSGMTRHISV KDDKELHLLL
MQNVPSDVYC SNAYYSFPNL PMNEKDWKEA DLIFDIDAKD LNLSCRGNHT LSICNECHEI
SNNSEKCSKC NSTKLEKKSL PCKNCIDSSK IEVKKLSEIL TNDLSVNKDD IQVYFSGNEG
FHIYVYNSQF QQNGSRERSE LVDYIMFNGA IPEKFGMKKF KPNRNSFPDF DEAGWKGRFS
KYVYGSKSKR SKIVSELLSN GYSSFQKTLD DVSENIGTKI DPNVTMDIHR IFRLPGSINS
KSGLTKIHCK DLVKFDAYVD SSFLSDDSVE VLANCPIEFK LKNKKFGPYH NEKVSVPTFA
AVYMVCKKLA TIA
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