| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0064 |
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| Symbol | |
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| ID | 5773060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 52088 |
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| End bp | 52927 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641315681 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001581402 |
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| Protein GI | 161527576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.751168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG GCTGTCATGT GTCAATTTCA GGATCTATTG ACAAATCAGT GGACAATGCA
GTAGAAAGAG AATGTTCAGC GTTTCAAATC TTTACTAGAA ATCCAAGAGG ATGGCATGCA
AAGACATTAA CAAAAGATGA CATTACCAAT TTTAAATCAA AATTAAAAGA AAGTAAAATT
GATAGATTTG CAACATGTGC ACATATGCCA TACTTACCAA ATTTAGCTAC TCCAAAAGAA
GATGGGTTTG AAAAATCAGT AAAAACTTTG GTAGATGAAG TTGAGAGATG TGCACAATTA
GGAATTCCAT ATCTTGTAAC ACACCTTGGA AGTCATTTAG GAACTGGAGA AGAGGCAGGA
ATTAAGAAAT TAGTTAAAGG ATTAACTGAA GCAGGTAAAA CAAAAAATGA TGTAATGATT
TTATTAGAAA ATACAGCAGG ACAAAAAAAT TCTGTTGGTT CAGATTTTAA ACAATTAGGA
GAAATATTCA AACAACTAAA ACCTGCAAAA AAATTTGGTG TTTGTTTAGA TACATGTCAT
GCATTTGTTT TTGGATATGA TTTAAGAACC GAAGCAAAAG TCAAAGAAAC TTTTTCAGAA
TTTGATAAAT ATGTAGGAAT AGATAATTTG AAAATTCTTC ATCTAAATGA CGCTAAAGGA
GATCTTGGTT GTAATCTTGA TAGGCACTAC CATTTAGGAA TGGGAGGAAT TGGCGAGAAA
GGAATTTCTG CCATTGTAAA GTTTGCAAAC AAGAAAAAAA TACCCATAAT TTTAGAGACT
CCTATTGATG ACGATAGAGA TGATTTTGAG AACATTAGAA AAGCAAAAGA ATTTGCGTAG
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| Protein sequence | MQIGCHVSIS GSIDKSVDNA VERECSAFQI FTRNPRGWHA KTLTKDDITN FKSKLKESKI
DRFATCAHMP YLPNLATPKE DGFEKSVKTL VDEVERCAQL GIPYLVTHLG SHLGTGEEAG
IKKLVKGLTE AGKTKNDVMI LLENTAGQKN SVGSDFKQLG EIFKQLKPAK KFGVCLDTCH
AFVFGYDLRT EAKVKETFSE FDKYVGIDNL KILHLNDAKG DLGCNLDRHY HLGMGGIGEK
GISAIVKFAN KKKIPIILET PIDDDRDDFE NIRKAKEFA
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