Gene Nmar_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0063 
Symbol 
ID5773112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp50600 
End bp52057 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content34% 
IMG OID641315680 
Productglycyl-tRNA synthetase 
Protein accessionYP_001581401 
Protein GI161527575 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.823142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATG AAGCAGTAAT GAAATTAGCA CTTGAGAGAG GATTTTACTT TCCAAGTTGT 
GAAGTTTATG CTGATGCACA AGCTGGATTT TGGGAATATG GTCCAACGGG AGTAGGATTA
AAAAATAAAT TTCTAGAATT GTGGAGAAGA GAACTAATCA GAAGAGATGG AATGCTTGAG
ATCGATGGTT CACAGATAAT GTCAAAATCA GTATTTGAAG CTTCAGGACA TTTGGGAAAT
TTTGCTGATC CGATAATAAA ATGTACAAAA TGTAATTCAA CATTTAGAGC AGATAGAACA
ATTGCAGAGT TAACTCAAAT TGAAATTCCT GAAAGCGCAG ATTTGGAAGA GTTTGATAAT
GCAATTAGTC AAAATAATAT AAAATGTCCA AAGTGTAAGG GGGATTTTGA TAAAACAAAG
AATTTCAATA TGATGTTTAG AGTGGGAATT GGTCCTGAAG AAGAGGAAGC ATACCTTAGA
CCAGAAACTT GTCAATCAAT CTTTGTAGAT TTTCCTAGAT TATACAAAAC TATGAGAGGA
AAGCTTCCTT TAGGAATTGC ACAGGTAGGA AAGAGTTTTA GAAATGAAAT TGCTCCCAGA
CAAAGTCTAT TGCGTCTAAG AGAATTTTAT CAAGCAGAGA TTGAAGTTTT TTGTAATCCA
TCAAAACTGG ATGAAGTTGA AAAGTTTACA GAAGTTCAAG ACACAGTAAT CAGAGTTCAA
ACAGATTCTG AACCAGTTGA AATGACTTGT AAAGAAGCAA TAGAGTCTGG AACTGTTCCA
AACAAGTTTG TAGCATATTA TCTAGGAATA TTAACTGAAT TTTATGAAAA AACAGGTATA
GATATTTCAA AAAGTAGATT TAGGAAATTG GGAGAAAAGG AAAAGGCATT CTATGCAGAA
GTTGCATTTG ATTTTGAGGT AGAAACCACA ATTGGTTGGT TAGAACTAGT TGCATGCAAC
TATAGATCAG ACTATGACTT GTCAAGTCAT GCAAACAAGA GTAAGGAAAA GTTTGAGATT
ATGGATGGAG ATGATAAGGT ATTACCACAC GTATTTGAGA TTTCAATGGG AATTGATAGG
AGTTTATACA CAATTTTGGA ACACTCACTC AAGGATGACA AAGAACATGA AAGAATAGTT
TTATCACTAA AACCATACTT AGCACCAACT CATGTTGGAA TTTTATCACT AGTAAAAAAA
GATGGATTAA AAGAGAAAAC AGATGAGATT TATCTTTCCA TTAAACGAAA GTTTGATGCT
TTCTTAGATC ATTCAGGTGC AATTGGCAGA AGATATAGAA GGTTAGACGA GATTGGAGCT
CCTTTTGCAG TTACGGTTGA TCATCAGACG TTAGAAGACG ATACTGTTAC AATTAGAAAA
AGAGACTCTA TGGAACAATC TAGGGTAAAG ATTTCTGATA TGGATTCTAT TCTTTTAGAA
TCTGTTAGTT TTCCATAG
 
Protein sequence
MDYEAVMKLA LERGFYFPSC EVYADAQAGF WEYGPTGVGL KNKFLELWRR ELIRRDGMLE 
IDGSQIMSKS VFEASGHLGN FADPIIKCTK CNSTFRADRT IAELTQIEIP ESADLEEFDN
AISQNNIKCP KCKGDFDKTK NFNMMFRVGI GPEEEEAYLR PETCQSIFVD FPRLYKTMRG
KLPLGIAQVG KSFRNEIAPR QSLLRLREFY QAEIEVFCNP SKLDEVEKFT EVQDTVIRVQ
TDSEPVEMTC KEAIESGTVP NKFVAYYLGI LTEFYEKTGI DISKSRFRKL GEKEKAFYAE
VAFDFEVETT IGWLELVACN YRSDYDLSSH ANKSKEKFEI MDGDDKVLPH VFEISMGIDR
SLYTILEHSL KDDKEHERIV LSLKPYLAPT HVGILSLVKK DGLKEKTDEI YLSIKRKFDA
FLDHSGAIGR RYRRLDEIGA PFAVTVDHQT LEDDTVTIRK RDSMEQSRVK ISDMDSILLE
SVSFP