Gene Nmar_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0058 
Symbol 
ID5773465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp46253 
End bp46975 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content33% 
IMG OID641315675 
Productprecorrin-2 C20-methyltransferase 
Protein accessionYP_001581396 
Protein GI161527570 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAT TGATAGGAAT TGGTGTTGGT CCTGGAGATC CTGAACTTCT TACAGTCAAG 
GCTGTAAAAG CAATCCAAGA TGCTGACATT ATCATGTGTC CTGCCTCAAA AGAAGACAGG
CCTAGTATTG CATTATCTGT AGTTGATTCC CTCATTGATA AATCAAAGAA TCAAGAGATT
GTAAAGCTAA TTTTTCCTAT GACTAAAGAC AAAGATGTCC TTGAAGAGAC TTGGAAAAGA
AATGCAAAGA TTATGGCTGA AACTGTACAA TCAGGAAAAA ATGTTGTTTA TCTAACAGTA
GGTGATCCAT TTTTGTATAG TACTTGGATA TACATGCACA AAGATCTTAC TGAAAAATAT
CCTGAAATGA ACATTAGTGT TATTCCTGGA ATTGTTTCAA TGTTTACATT TGCATCAAAA
GTTGGTGTAA GTATAGCTGA AGGAGCTGAA AAAGTTGCAA TAATTCCTTC TTGCTATGAT
TTGAGTAGTG TTAAAGAGAT TGCAAAAAAT TCAGAATCTA TGATATTTCT AAAAGATGGT
AGATATTTTG ATCAAGTAAT TGATGTTCTA AAAGAATCAG GATTCCCTGA TAACTCTATT
TTTGCAATTG GACAAGACTT GGGAACAGAA AATGAAATTA TTAGAAAGAT GACTTTGGGT
GAAGTAAATG ATGATACATT AACTACAAAA TACTTTTCAA TCTTGGTGGT AAAACGTGTC
TGA
 
Protein sequence
MPGLIGIGVG PGDPELLTVK AVKAIQDADI IMCPASKEDR PSIALSVVDS LIDKSKNQEI 
VKLIFPMTKD KDVLEETWKR NAKIMAETVQ SGKNVVYLTV GDPFLYSTWI YMHKDLTEKY
PEMNISVIPG IVSMFTFASK VGVSIAEGAE KVAIIPSCYD LSSVKEIAKN SESMIFLKDG
RYFDQVIDVL KESGFPDNSI FAIGQDLGTE NEIIRKMTLG EVNDDTLTTK YFSILVVKRV