| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0055 |
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| Symbol | |
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| ID | 5774232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 43073 |
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| End bp | 45031 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641315672 |
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| Product | hypothetical protein |
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| Protein accession | YP_001581393 |
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| Protein GI | 161527567 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGCA TGGCATTATC AGGAATTGAA TTACGATATT TAGTTGATAA AATTTCAAAA
CAAGTCGAAG ATTACTATGT CAGCAATATC TATGGAATAA CAAAAGACAG TATTCTCTTC
AAATTACATC ATACTGAAAA AAGTGATCTA TTCATGATGA TCTCTACCTC AGGAGTTTGG
TTAACAGAAG TAAAAATTGA TCAAGTTGAA CCAAATAAGT TGCTCAAAAG ACTAAGAAGT
GATCTCCTTC GATTAAAATT AAAAAAGATC GAACAAATTG GTGCTGAAAG GATTGCATAT
TTTAGATTTG AAGGATTTGG AAAAGAGTTT GTTTTAGTAG GTGAATTTTT TGGAGATGGA
AATATTTTAC TTTGCAACAA TGAGATGAAA ATTCTTGCAT TGCAGCATTC AATAGATGTA
AGACATAGAA AACTAAGTGT GGGGTTAGAA TATGCTCAAC CCCCACAAAG TGGATTAGAT
ATTTTCAATT TAGCAGAAAA GGATTTTGAA GATATCAAAA CAACAGAATT GGTTGCGGCA
AAATGGTTTG GACGTACTCT AGGTTTGCCA AAAAAATATG TAGAAGGTAT TTTTGAAATT
GCAAATGTTG ATCCAAAAAA GATTGGTAAT CTTCTAACTG AGGAAGAGAT AGAAAAGATC
TTTGAGACAA CAAAGAAAAC CGTATCAGAC ATTGTTTCAG AGAATCATGA TCCTATCATA
GTAAGAAATG AAAAAACAGA AGTTCTTCCA ATTCAACTTG GAAAAATTGA AGGAGAGATT
ACCAAAGTAA ACAGCTTCAT AGAAGGACTT GACACTGTTT TTACACAAAA TATTGTAGAT
AAAGGAAAAT CAATTCAGAC TAGTGGCTCA GACAAGAAGA TAAAAGAATT AGAAACTCAG
ATTTCTGAGC AGGAAAAAGC CATTCAAACA GTAAAAGAGA GGTCAAAAAA TATCACAAAT
GTAGCAAATT CACTCTATGA TATGATTTCA AAAGGGATTT TATCAATTGA AGATAGTTCT
GCACAAGAAA TCATGACAGC AAACAATGCA AAATTGATTT CAGAAAAAGG GATTCCACTA
ATTGTTATTC AAGATGAGAA AATAAAGGTA GACACAAAGG CGTCTTTGCA ATCAATTGCA
TCTGCATTAT TTAATGAGGC AAAAAAACAA TCAGGTGCAA TAAGTTCTAT TGAAGAAATA
AAATCTAAGA CTTTAAAAAA ATTAGAGAAA CTACAAAACA AAACAGAATC TGAGAAAGAC
ACGATTCTAG TTTCTGAAAT TAGAAAAAAG AACTGGTATG AAAGATATAG ATGGTTCTAC
ACATCTGATG GATTCTTAGT GATTGGTGGA AGAGATGCTG CATCAAACTC TGCAGTGGTA
AGAAAACATT TGGACAAGAA TGATAAAATT TTCCATGGGG ATATTTTTGG TTCTCCATTT
TTTATTATCA AAGATGCACA AAATGTTCCT GATACAAGTA TGAATGAAGT TTCACATGCA
ACAGTTTGTT TTAGTCGTGC ATGGAGAGAA GGAATGTACG GTGTTAGTGC ATATTGGGTA
AATCCCGATC AAGTAAAAAA ATCAGCTCCA AGTGGAGAAT TTCTTCCAAA AGGATCATTT
ACAATTGAAG GGCAAAGAAA TTTCATTAAA AGTGGAAATC TCAAACTAGC AGTGGGGATA
ATTCCACAAG AAGATGGCTA TGCATTAACA TGTGGCCCAC CTGAAACAAT CAAGAAAAAT
TCAATCTGTT ATGCAATAAT TGAACCACAA GGAATCGAAA TGGTTGATGC TGCAAAGAAA
ATTAGGCTGG AATTCTCAAA AATTCATGAA GAAATTACTA AAAAAATCAG TATTGATGAA
TTTGTTCGCG TAATGCCTGC TGGAAAAAGC CAGGTAAAAG ATGTTAACAG AGGGGAAGCA
GATATTCAAA ATTTCATTGA TACTGAAGAG GATGACTAG
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| Protein sequence | MIGMALSGIE LRYLVDKISK QVEDYYVSNI YGITKDSILF KLHHTEKSDL FMMISTSGVW
LTEVKIDQVE PNKLLKRLRS DLLRLKLKKI EQIGAERIAY FRFEGFGKEF VLVGEFFGDG
NILLCNNEMK ILALQHSIDV RHRKLSVGLE YAQPPQSGLD IFNLAEKDFE DIKTTELVAA
KWFGRTLGLP KKYVEGIFEI ANVDPKKIGN LLTEEEIEKI FETTKKTVSD IVSENHDPII
VRNEKTEVLP IQLGKIEGEI TKVNSFIEGL DTVFTQNIVD KGKSIQTSGS DKKIKELETQ
ISEQEKAIQT VKERSKNITN VANSLYDMIS KGILSIEDSS AQEIMTANNA KLISEKGIPL
IVIQDEKIKV DTKASLQSIA SALFNEAKKQ SGAISSIEEI KSKTLKKLEK LQNKTESEKD
TILVSEIRKK NWYERYRWFY TSDGFLVIGG RDAASNSAVV RKHLDKNDKI FHGDIFGSPF
FIIKDAQNVP DTSMNEVSHA TVCFSRAWRE GMYGVSAYWV NPDQVKKSAP SGEFLPKGSF
TIEGQRNFIK SGNLKLAVGI IPQEDGYALT CGPPETIKKN SICYAIIEPQ GIEMVDAAKK
IRLEFSKIHE EITKKISIDE FVRVMPAGKS QVKDVNRGEA DIQNFIDTEE DD
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