Gene Nmar_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0038 
Symbol 
ID5774752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp29723 
End bp30280 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content38% 
IMG OID641315655 
ProductGTP cyclohydrolase I 
Protein accessionYP_001581376 
Protein GI161527550 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAG AACGTGTAAA GAAACTTGTC AGAGAATTGA TAATCGAAGT TGGCGAAGAT 
CCTACCCGTG AGGGCTTGCG TGAAACACCT GAAAGAATCG CAAACATGTA TCAGGAAATC 
TTTTCTGGAT ATGACTCTGA TTCAGAATTA GCTGTTCAAT TCTCAGAAGA TTCTGACGTA 
GTTGTAGCAC GTGATATTCA GTTTTACTCA ATGTGTGAGC ACCATATGCT TCCATTCTTT 
GGTAAAATCC ACATTGCATA TTCTCCAAAT GGCAGAGTCT TTGGAATCTC AAAACTAGTA 
AGACTAGTTG AAAAGTACTC TAAACGACTC CAGATTCAAG AACGCCTAAC CAAAAACATT 
GCAGATGAAC TATACTCTCA AGGTGTCAAG GGAGTAGTTG TTTTAGCTGA TGCAGAGCAC 
CTATGTATGA AAATGCGTGG TGTCAGAAAT GATGCAACAC TATCATCATC AGCATTTAGA 
GGAATTTATG AAAATAAAGA GGATAAAGAG AGCATTATGA CTCTAATTCG AAAACGTGCT 
TCAGATTCTG CATATTAG
 
Protein sequence
MDEERVKKLV RELIIEVGED PTREGLRETP ERIANMYQEI FSGYDSDSEL AVQFSEDSDV 
VVARDIQFYS MCEHHMLPFF GKIHIAYSPN GRVFGISKLV RLVEKYSKRL QIQERLTKNI 
ADELYSQGVK GVVVLADAEH LCMKMRGVRN DATLSSSAFR GIYENKEDKE SIMTLIRKRA 
SDSAY