Gene Nmar_0029 details

Gene Information

• Locus tag: Nmar_0029
• ID: 5774199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 23675
• End bp: 24322
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641315646
• Product: hypothetical protein
• Protein accession: YP_001581367
• Protein GI: 161527541
• COG category: [N] Cell motility
• COG ID: [COG5491] Conserved protein implicated in secretion

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTAATT TGAGTAACAA GTGGACTAAA CCACCTACTA CTAGTATTAC TGAAAAAATT 
GGTGATACTG TCAAGCCTAA AGGTGCTCTA AAACCACGTG TTCAAGAAGG AGTCAAAAGA 
TTACGATTAC AGATTCAAAA ATTAGACAAA ATGCTATCTG GATTGAAAGA ACGTGATGAG 
CAATTATTTG CAAGAATTGT AGAGGCAACC CAGAAACATG ATACTCAAAC AAGCAAGGTT 
CTAGGAAATG AACTAGCAGA AATTAGAAAA GTTATCAAAA TTATGAGCAG TGCCAGAGTT 
GCTCTAGAAC AAATTGAATT ACGATTAACA ACATTTAGTG ATTTAGGAGA TACAGTAGTA 
GCTATCATGC CAACAATGGG ATTGATGAAG AATCTCAAAT CCTCTCTTGG AAAAGTAATG 
CCTGGAGCAG AAGCTGAAAT TGGTCAGATG GCAGAAATGT TAGGTGGATT TATGACTGAA 
AGTTTCTCAG GTGATGCTGC ATTTGGAATG GATGAGACAA CAAACGCAGA ATCTGATGCA 
ATTCTTAAAG AAGCAGCAGC TGTTGCAGAA AGCTCTGCAG GACAAATGTT CCCATCAGTT 
CCTACTGAAT CAGCAGCATC TACAGAATCA ACTTCAAAGT TTTACTAA 

 

Protein sequence

MANLSNKWTK PPTTSITEKI GDTVKPKGAL KPRVQEGVKR LRLQIQKLDK MLSGLKERDE 
QLFARIVEAT QKHDTQTSKV LGNELAEIRK VIKIMSSARV ALEQIELRLT TFSDLGDTVV 
AIMPTMGLMK NLKSSLGKVM PGAEAEIGQM AEMLGGFMTE SFSGDAAFGM DETTNAESDA 
ILKEAAAVAE SSAGQMFPSV PTESAASTES TSKFY