Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0013 |
Symbol | |
ID | 5773622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 12800 |
End bp | 13720 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641315630 |
Product | transcription factor TFIIB cyclin-related protein |
Protein accession | YP_001581351 |
Protein GI | 161527525 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTAGAAA ATTATTCAAA CGATTATGAT GTCAAGTGTA AACTAGACGC TTGCAAAACC TACCCTGCAA TAACAGATTC TGAACGAGGA GAAATTGTTT GTGGGGGTTG CGGTCTTATT CTAGTGCAAA ACTTAGCTGA CGCATCATAT GAAAACAACG GTTACACTCA GGAAGACTTT ATGAAGCAAG CAAGAACAGG TCCTGCAACA TCTCTAACGA TGTTTGACAA GGGACTATCA ACTGTAATTG GAAGCAATAA AGATTCTTCA GGAAATGCAT TACCAAGCAA AACAAAATAT GAATTCAATA GACTTCGAAC ATGGGATCAA AGAAGCAAAT CAAGAAAGAC TGCTACTTTG AGCAAAGCCT TTACTTTACT TCATTCAATG AAGACAAAGT TAAGCGTGCC AGATAATGTG GTAGAAAATG CTGCCTATAT CTACAGAAAA ATTGTTAGTG CAAAATTGAC ACGAGGAAGA ACTATGGCAT CATTGATTTC AGCCTCGTTG TATGCAGCAT GTAGAGAAAA TAATATTCCA AGAACATTAG ATGATATTGC AAAAGCTGGT AATGTTGAGA GAAGAATACT TTCCCGAGAT TTGAGAACCA TAATCAAAAA GCTTGGATTA AATCTTAATC AGTACGACAC TGCCTCGTTT ATCTCCAAAA TTTCAAACAA TATGAATTTG AAAGAAACGA CAAAACGAGG AGCATTTGAT ATACTAAAAC GCTGTGAAGA AGAAGGAATT ACTGCTGGAA AACACCCAGT AGCACAAGCG GCTGCTTCAT TATACATTTC ATGTGTACTG AATGGCGAGA GAGTCAGTCA AAAAAGAGTC TCAGTTGAAG CAGGAGTCAG TGACGTAACA ATAAGAAACA GGACTGTTTT GATTAAGAAG ATACTAAAGC TTGATGAGTA A
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Protein sequence | MVENYSNDYD VKCKLDACKT YPAITDSERG EIVCGGCGLI LVQNLADASY ENNGYTQEDF MKQARTGPAT SLTMFDKGLS TVIGSNKDSS GNALPSKTKY EFNRLRTWDQ RSKSRKTATL SKAFTLLHSM KTKLSVPDNV VENAAYIYRK IVSAKLTRGR TMASLISASL YAACRENNIP RTLDDIAKAG NVERRILSRD LRTIIKKLGL NLNQYDTASF ISKISNNMNL KETTKRGAFD ILKRCEEEGI TAGKHPVAQA AASLYISCVL NGERVSQKRV SVEAGVSDVT IRNRTVLIKK ILKLDE
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