| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0012 |
|---|
| Symbol | |
|---|
| ID | 5773576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 12340 |
|---|
| End bp | 12783 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641315629 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001581350 |
|---|
| Protein GI | 161527524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TGAAAATTAG TTTTTTATTT AGTTTAACTG TAATAGCTAT TTTGATTAGC
TTAACACCTT CATTTGCACA AGAAACTGAA CAAGAACCAG AACCTCCAGG ACTTCCTGAA
CCTTCTCCTG AACCTGAACC AATTCCATTA CCTGAACCTG AACCTGTTCC TGAACCATTT
CCTGAAGAGA CTGAATCAGA AAAAATCCAG AGACTAACTG AAGAAAATGA ACAATTAAAG
CAACAAAACA AAAACCTTCA AGGTCAAATA TCTACTTTAA AGAATGAAAA ATCAGGATTA
CAATCACAAA TATCACAATT GAATGAAAGA ATCAAAGACT TGGAAGAAAT CACAATAGAA
CAACTTCGTG TAATTATGGA ATTGGTAAAT AGACTAAAAG ATGTATTTTA TGAAAAAATA
ATTTCTCCTA CATTCACCAT GTAG
|
|---|
| Protein sequence | MDKMKISFLF SLTVIAILIS LTPSFAQETE QEPEPPGLPE PSPEPEPIPL PEPEPVPEPF
PEETESEKIQ RLTEENEQLK QQNKNLQGQI STLKNEKSGL QSQISQLNER IKDLEEITIE
QLRVIMELVN RLKDVFYEKI ISPTFTM
|
|---|
| |