| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0011 |
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| Symbol | |
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| ID | 5773582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 9889 |
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| End bp | 12030 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641315628 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001581349 |
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| Protein GI | 161527523 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA TTATTTTAAA AGTTGATGAA ATTCCGCAAC AACATGTTGG AAGAGGAAGA
GCAATAATTG ATCCTAAAAT TATTGAAGAT AACAAATGGA ATACTGGCCA AATCTTAGAA
TTAACATATA ACAAAAAAAC ACATGTAAAA CTTTGGCCAG GAAATCCTGA AGAATATGGT
ACAGGAATTA TCAAAATTGA TGGAATGGCA AGACAAAACA TTGGAGCAGG AATTGGTGAT
AAAATTTCTT TAAAATCCGT TGAAGCTGCA AACGCAGAAC AGATTGTTTT GTCTCCTACT
GAGAAAATAT CTGCTGAAGG ATTACAAGAA TACATGACCT ATAACTATCT TAATCATGTA
TTTACAACTG GAGATACATT ATCTCTTAAC ACTCAGATGG GTGGACGAGT TCAATTCATT
GTAACTAGCA CAAAACCTTC AAAACCAGTA ATTGTTACTG AAAATACAAT TTTCAAACTT
GGCACAATGA CAAAATCAGT TGATGCTTCT GTTCCAAGAA TAACATATGA TGAACTAGGT
GGTCTCAAAA ACGAAGTCCA AAAAATTCGT GAGATGGTAG AATTACCAAT GAGGCATCCA
GAGCTATTTG ATAAAATTGG TGTAGAAGCT CCAAAAGGAG TTTTATTATA TGGCCCTCCA
GGTACAGGAA AAACTCTTCT TGCAAAGGCA GTAGCTGGTG AAACTAATGC CCACTTTATC
TCACTTAGTG GTCCTGAAAT CATGGGCAAG TACTATGGTG AAAGTGAAGA AAAAATTAGA
GAGATCTTCA ATCAAGCTGA AGAGAATTCT CCAAGCATAA TCTTCATTGA TGAGATAGAT
TCCATTGCTC CAAAAAGAGA CGAAGTTTCA GGAGAAGTTG AAAAGAGAAT TGTTTCGCAA
CTTTTGACTT TGATGGATGG AATGAAATCT AGAGGTAAAG TTGTAGTTAT TGCAGCTACC
AATAGACCAG ACTCTATTGA TCCTGCACTT AGAAGACCTG GAAGATTTGA TAGAGAAATT
GAAATTGGAA TTCCTGATGA TGAAGGAAGA TTTGAAATTC TTTCAATCCA CACACGTGGA
ATGCCGATAG ATGAAAAGGT AGATCTCAAA CAAATCTCAA AGACAACACA TGGATTTGTT
GGAGCTGACT TGGAAGTCTT GTCAAAAGAA GCTGCAATGA GATCACTGCG TAGAATTCTT
CCTGAGATAG ATCTTGATGA AGATAAGATA TCTGCAGAAA TTCTACAAAA AATAGAGATA
ACAAGTGAAG ACTTTAGAGA TGCACTAAAA GAAGTCAGAC CAAGTGCATT ACGTGAAGTC
CAAGTACAGA TTCCTAACGT AAGTTGGGAT GATGTTGGTG GTCTTGATGA ACTAAAAGAA
GAATTACGTG AGGCAGTTGA ATGGCCTATC AAACACAAAG AAGCATTTGA CTATGTTGAT
GTTGAAACAC CAAAAGGAAT CCTATTACAT GGTCCACCTG GAACTGGTAA GACATTGATT
GCAAAAGCTC TTGCAAAAAT GACAGAGTCT AATTTTATCA GCATAAAGGG ACCAGAATTA
CTCTCAAAAT GGGTCGGCGA ATCTGAAAAA GGAGTCAGAG AAATCTTCAG AAAAGCACGA
CAAGCAGCAC CTTGTATAAT CTTCTTAGAT GAAGTAGATG CACTAGTACC CAGAAGAGGC
AGTGGTGGTT CAGAATCACA TGTAACAGAG AGTGTGGTAT CTCAAATTCT AACTGAGATA
GATGGACTAG AAGAACTACA CAATGTGTTG ATAGTTGGTG CAACAAATCG ATTAGACATT
GTAGATGATG CACTGCTTAG ACCTGGAAGA TTTGATAGAA TCATCGAAGT TCCAAATCCA
GATGCAAAAG GAAGACGAAA CATATTTGAG ATTCATACAA AAAAGAAACC ACTTGCAAGT
GATGTGGATA TTGCAAAACT TGTAGAGTTG ACTGATGGAT TTAGTGGAGC TGAAATTGCA
GCAGTTGCAA ACAGAGCAGC AATAGCAGCT CTTAAAAAAT ATGTTAGCGG CAAAGCACAA
AATGTCAAAG ACATCAAGAT ATCTCAACAA GAACTAGTTG ATGCAATTGA CAAGGTAAAG
CCTCGCAAAA AAGAGATTCC ACTTGCTCAG TCCATAAAAT AG
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| Protein sequence | MSEIILKVDE IPQQHVGRGR AIIDPKIIED NKWNTGQILE LTYNKKTHVK LWPGNPEEYG
TGIIKIDGMA RQNIGAGIGD KISLKSVEAA NAEQIVLSPT EKISAEGLQE YMTYNYLNHV
FTTGDTLSLN TQMGGRVQFI VTSTKPSKPV IVTENTIFKL GTMTKSVDAS VPRITYDELG
GLKNEVQKIR EMVELPMRHP ELFDKIGVEA PKGVLLYGPP GTGKTLLAKA VAGETNAHFI
SLSGPEIMGK YYGESEEKIR EIFNQAEENS PSIIFIDEID SIAPKRDEVS GEVEKRIVSQ
LLTLMDGMKS RGKVVVIAAT NRPDSIDPAL RRPGRFDREI EIGIPDDEGR FEILSIHTRG
MPIDEKVDLK QISKTTHGFV GADLEVLSKE AAMRSLRRIL PEIDLDEDKI SAEILQKIEI
TSEDFRDALK EVRPSALREV QVQIPNVSWD DVGGLDELKE ELREAVEWPI KHKEAFDYVD
VETPKGILLH GPPGTGKTLI AKALAKMTES NFISIKGPEL LSKWVGESEK GVREIFRKAR
QAAPCIIFLD EVDALVPRRG SGGSESHVTE SVVSQILTEI DGLEELHNVL IVGATNRLDI
VDDALLRPGR FDRIIEVPNP DAKGRRNIFE IHTKKKPLAS DVDIAKLVEL TDGFSGAEIA
AVANRAAIAA LKKYVSGKAQ NVKDIKISQQ ELVDAIDKVK PRKKEIPLAQ SIK
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