Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0010 |
Symbol | |
ID | 5773986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 9370 |
End bp | 9861 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641315627 |
Product | heat shock protein HSP20 |
Protein accession | YP_001581348 |
Protein GI | 161527522 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTTG ATAGCGAATT TGATAGAATC TTCAAACAGA TGTCTAGATC TTTTTTCAAT ACAGATGACA TCTTTGAGGG ATTCAAGGGA AATGGTTCTG AATCTGGCCC ATTTTATTAT GGTTATACAA TGACCGTGGG TCCTGATGGG AAACCTGTTG TAAAAGAATA TGGAAACGTC AAACCAGGCC AACTTCCAGC TTCTGATACA CGAGAACCAA TAGTAGACAC AATTGTTGAT GAAAAAGAAA AAGTTGTAAA ACTCATAGCT GAGATGCCAG GAGTTGAAAA GACTGATGTC AAAATTATTG TTGACAACAA AGTTGTAGAT TTGTCCGCAG AACGTGGTGA TAAAAAATAT CATGTCAAAG TTCCAGTACA ACACAAAGTT GATGAAAACT CTGCAAAGGC TTCCTACAAA AACGGAATTT TGCAACTTGT CTTCAAGTTA GTTGAAGAAA AACCAACTGG CAAACAGGTG GAGGTTGAAT AA
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Protein sequence | MFFDSEFDRI FKQMSRSFFN TDDIFEGFKG NGSESGPFYY GYTMTVGPDG KPVVKEYGNV KPGQLPASDT REPIVDTIVD EKEKVVKLIA EMPGVEKTDV KIIVDNKVVD LSAERGDKKY HVKVPVQHKV DENSAKASYK NGILQLVFKL VEEKPTGKQV EVE
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