Gene Nmar_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0010 
Symbol 
ID5773986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp9370 
End bp9861 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content37% 
IMG OID641315627 
Productheat shock protein HSP20 
Protein accessionYP_001581348 
Protein GI161527522 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTG ATAGCGAATT TGATAGAATC TTCAAACAGA TGTCTAGATC TTTTTTCAAT 
ACAGATGACA TCTTTGAGGG ATTCAAGGGA AATGGTTCTG AATCTGGCCC ATTTTATTAT
GGTTATACAA TGACCGTGGG TCCTGATGGG AAACCTGTTG TAAAAGAATA TGGAAACGTC
AAACCAGGCC AACTTCCAGC TTCTGATACA CGAGAACCAA TAGTAGACAC AATTGTTGAT
GAAAAAGAAA AAGTTGTAAA ACTCATAGCT GAGATGCCAG GAGTTGAAAA GACTGATGTC
AAAATTATTG TTGACAACAA AGTTGTAGAT TTGTCCGCAG AACGTGGTGA TAAAAAATAT
CATGTCAAAG TTCCAGTACA ACACAAAGTT GATGAAAACT CTGCAAAGGC TTCCTACAAA
AACGGAATTT TGCAACTTGT CTTCAAGTTA GTTGAAGAAA AACCAACTGG CAAACAGGTG
GAGGTTGAAT AA
 
Protein sequence
MFFDSEFDRI FKQMSRSFFN TDDIFEGFKG NGSESGPFYY GYTMTVGPDG KPVVKEYGNV 
KPGQLPASDT REPIVDTIVD EKEKVVKLIA EMPGVEKTDV KIIVDNKVVD LSAERGDKKY
HVKVPVQHKV DENSAKASYK NGILQLVFKL VEEKPTGKQV EVE