Gene Nmar_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0005 
Symbol 
ID5773673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp4356 
End bp5072 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content33% 
IMG OID641315622 
Productprecorrin-6y C5,15-methyltransferase subunit CbiE 
Protein accessionYP_001581343 
Protein GI161527517 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAAAAG TTATTGCCGT AGGTGTAGGT CCAGGTTCAC CAAAATATGT AACAGAAGTT 
GTCAAAGATA TAGTTCAAAA TTGTGATATT GTGATTGGGT ACAAATACAC TTTAAAAACA
ATCGAACACC TTCTTGAGGG CAAAGAAATT CATGAAATTA CAATGAATAA TCAAGAAGAA
TCCTATCAAG AAGTTTTTCC AAGATTAGGA GATAAAACTC TAGTAATTCC ATTTACTGGA
GATGTAAATT TTTCAGAATC TGAAGTGGTA GATAGATTAA TAGAAATTTT TGGTGAGGTA
GAAATAGTTC CAGGAATTAG TTCTATACAA GTAGCAGCAT CCAGAGCACA AGTACCGCTT
GATAAATCTA GAGTGATTAC AATGCATGTA ACAACTCCAA TTGAAGATAA GAAATTAGAG
CTGCAAAAGG CATTGATTGA TGGATTTAGT GTGGTGTTAG TTCCAAGACC ATGGCCAAAA
CAACCAGACA AGCATTTTAT GCCATCAGAA ATTGCAGTTT ATCTTCGTGA ATGTGGTTTT
GATACTACAA GGATTAAAGT TCATGTTTTT GAAGCCATAA CCACTGAAAA TGAAACTAGT
TTTGAAGGAA CTGTAAAAGA TTTGGAAGGA AAAGAGTTTT CAGATTTGTC AGTAATGGTG
TTTAATCAAA CAAGTTTAGA TTCTTACATG AATTACAGAT GGCAATGGGA AAATTAG
 
Protein sequence
MGKVIAVGVG PGSPKYVTEV VKDIVQNCDI VIGYKYTLKT IEHLLEGKEI HEITMNNQEE 
SYQEVFPRLG DKTLVIPFTG DVNFSESEVV DRLIEIFGEV EIVPGISSIQ VAASRAQVPL
DKSRVITMHV TTPIEDKKLE LQKALIDGFS VVLVPRPWPK QPDKHFMPSE IAVYLRECGF
DTTRIKVHVF EAITTENETS FEGTVKDLEG KEFSDLSVMV FNQTSLDSYM NYRWQWEN