Gene Nmar_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0004 
Symbol 
ID5773494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp3463 
End bp4359 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content33% 
IMG OID641315621 
Producthypothetical protein 
Protein accessionYP_001581342 
Protein GI161527516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTAA CAATAACATT ACTAGCATTA TTCATATTTT CCTCAGGATA TATTCTCAAT 
GAATCGTTTG CAGAAGTTTC TGAAAACCAA GTATTTCTCC TAGAGGGCTC TGGTTTTGCT
GTAACTGAAG AACAAATCAA ATTTTCAGAA ATTGATTTTG GTTTATCATC TCAAGACCAA
CGAGGTAGTA CCATTAATTT TGTAATAGAG GATGGCTTTA TCACACTTGA TGAAGAAGAA
TTTATCATTT CAGAATTAGA AGGAAAATTT TTGCGTGAAG GCCGTTATAT TCGAATTAAT
GGAGATATAG AAAGTTCTAG TGGTTTTGAT ACTACAATCA GCTTCTTTGG AAGATTAGTT
GCAGAAAGTA AAGATGCTGC AGTTTATGGT TTTACTGGTA GAATTACAAC AACTGATGAT
ACCTACAAAA TAATTTACAC TACAAAATTA TCTTCATTAT CAAAAATTGA TGTAACCCCA
ACAATTGAAG AATCACAAGA ACTTTCAATT CGTATTCTTA AAGGTGCTTC CTCTCAAGGA
GTTTCGGATA GCTATGTCGG ACTAACAACA AGTGGCTCAA TTAGGTTAGG ATATTTTTCT
GATGATAGGA TATCAATTGA ACCAGGAACT ACTATTACAA TCATAAATGA TGATAATGTT
TCTCATAGTA TTCTTAGTGG AAAAGAAAAT TATGGTGATA GACATGATCC ATTTGATCCA
GATGGTAGAA TCTCAACTGG CGATATTGCC CCTGGCAAAT CTGTTAACAT TACATTTGAT
GAAGCAGGAT TTTACAGATT ATATGATCCA GACTACCCTT GGATGAAAAT TGTAGCATAT
GTATTCCCCA ATTCTGATAA TCTAATTCTT AGACAAGGCC AAAATCTAGG AAACTAA
 
Protein sequence
MKLTITLLAL FIFSSGYILN ESFAEVSENQ VFLLEGSGFA VTEEQIKFSE IDFGLSSQDQ 
RGSTINFVIE DGFITLDEEE FIISELEGKF LREGRYIRIN GDIESSSGFD TTISFFGRLV
AESKDAAVYG FTGRITTTDD TYKIIYTTKL SSLSKIDVTP TIEESQELSI RILKGASSQG
VSDSYVGLTT SGSIRLGYFS DDRISIEPGT TITIINDDNV SHSILSGKEN YGDRHDPFDP
DGRISTGDIA PGKSVNITFD EAGFYRLYDP DYPWMKIVAY VFPNSDNLIL RQGQNLGN