Gene Nmar_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0003 
Symbol 
ID5774069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp2881 
End bp3387 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content36% 
IMG OID641315620 
Producthypothetical protein 
Protein accessionYP_001581341 
Protein GI161527515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCT TTACTGGTAC ATATCAAATT GGTTCAATGT CTACTGTGAG CCAGGAAGAA 
GCTGATATTT TCATGTCAGA ATTTGAGGAA TTAGTTTTGG ATATTGATGG ATTTGGGATA
TTTACTCATA ACACATCATT AGCACTTCCA ATGTTTATTC CAGGATTTGG TGTTGCTTGG
GGTTTGTTTT CAGCATGGTC AACAGGATTT GCATTTGCAG CAATAACTAC AACTGCTCCA
ATTTTAGAAA AAGTCCCCCC CTTAGCAATT TTATTTTTAT CTCCATTTGG CTTGATGGAG
TTAACTGCAT ATTCTTTAGC AACATCTAGG AGTTTTATCC TGATTAGAGC AATAACGAAA
AAAATCAATC TTAGAACCTT CATCAAACCA ACTGTAATCG AGATTGGTGT TGTAGTTGGG
TTGCTTTTGG CAGGAGGGTA TCTAGAATTT TACATGATAG AAATGGCTCA AGAACAAGGC
CTCCAAATAC CTGGAATTGA TATCTGA
 
Protein sequence
MAIFTGTYQI GSMSTVSQEE ADIFMSEFEE LVLDIDGFGI FTHNTSLALP MFIPGFGVAW 
GLFSAWSTGF AFAAITTTAP ILEKVPPLAI LFLSPFGLME LTAYSLATSR SFILIRAITK
KINLRTFIKP TVIEIGVVVG LLLAGGYLEF YMIEMAQEQG LQIPGIDI