Gene Bmul_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBmul_3080 
Symbol 
ID5767873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia multivorans ATCC 17616 
KingdomBacteria 
Replicon accessionNC_010084 
Strand
Start bp3363006 
End bp3364169 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID641315538 
Productdiaminopimelate epimerase 
Protein accessionYP_001581261 
Protein GI161526249 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.188461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGT CGCCCGGCCC ATGCCGCGAA CTTCGTCCGC CGCGCGCGTG CGTGCCATGC 
CGCGCCGGGT CAATCTGCGC CGTCGTCGCG CGCGCAACCA GTCGGCCAAT CGGCCGAATC
GGCGTGCGTT CATGCCCGCG GCCCGACGCG AAGCGCCCGT CCGGGCGGGA CGCCCCGGTC
CGCTGCATGT ATCATTTGCG GTTGAGATCG GCCCGACGAA CGGCGCCGCG CGATAGCGCG
CGTCGTCGCC CGCGCGGTGC CGACCGCCTC GATCGCCATG GAATTCCGGA CCCAGTGAAA
CTCTCGTTCA CCAAGATGCA CGGCGCGGGC AACGACTTCG TCGTGCTCGA CGGCTATTCG
CGCACGCTGC CGCCGCTCAC CGCCGCGCAG GTGCGCGCGC TCGCCAGCCG CCACTTCGGC
ATCGGCGCCG ACCAGCTGCT GCTCGTCGAG AAGCCGACCG TCGACGGCGC CGACTTCAAG
TACCGGATCT TCAACTGCGA CGGCGGCGAA GTCGAACACT GCGGCAACGG CGCGCGCTGC
TTCGTGAAAT TCGTCAGCGA TCGCGGCCTC ACCGACAAGC GCAGCGTGCG CGTGCAGGTG
ATGAAGGGCC TCATCACGCT GACGATGCAG GACAACGGCG AAGTGGTCGT CGACATGGGC
GCGCCCGTGT TCGCGCCCGA ACAGGTGCCG TTCGACGCGT CGGGCCTCGA CGGCCGCAGC
GAAGGCCGCG ACACGCTGTG GCCGCTCGAG GTCGGCGGCC GCACGCGCTG GATCTCGACG
GTCTCGATGG GCAATCCGCA TGCGGTACAG GTCGTCGACG ATGCCGAAGC GTATCCGGTG
CTCGAGGAAG GCCCGCTGAT CGAGCGCCAC GCGCGCTTTC CGCAGCGCGT GAATGCCGGC
TTCATGCAGA TCGTGTCGCG CAGCGAGGTG AAGCTGCGCG TCTACGAACG CGGCGCAGGC
GAAACGCTCG CATGCGGCAC CGGCGCATGC GCGGCCGTCG CGGCCGGCAT CCGGCGCGGG
CTGCTCGATT CGCCGGTCAC CGTGCACACG CACGGCGGCA CGCTGACGAT CGGCTGGGAC
GGCGCACGCG ACGAATCGGC CGCGCTGATG ATGGCCGGCC CCGCGGCGAC CGTGTTCGAA
GGCGAGATCG ACCTGCCCGC CTGA
 
Protein sequence
MRASPGPCRE LRPPRACVPC RAGSICAVVA RATSRPIGRI GVRSCPRPDA KRPSGRDAPV 
RCMYHLRLRS ARRTAPRDSA RRRPRGADRL DRHGIPDPVK LSFTKMHGAG NDFVVLDGYS
RTLPPLTAAQ VRALASRHFG IGADQLLLVE KPTVDGADFK YRIFNCDGGE VEHCGNGARC
FVKFVSDRGL TDKRSVRVQV MKGLITLTMQ DNGEVVVDMG APVFAPEQVP FDASGLDGRS
EGRDTLWPLE VGGRTRWIST VSMGNPHAVQ VVDDAEAYPV LEEGPLIERH ARFPQRVNAG
FMQIVSRSEV KLRVYERGAG ETLACGTGAC AAVAAGIRRG LLDSPVTVHT HGGTLTIGWD
GARDESAALM MAGPAATVFE GEIDLPA