| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_2666 |
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| Symbol | secD |
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| ID | 5766274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia multivorans ATCC 17616 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010084 |
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| Strand | + |
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| Start bp | 2911442 |
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| End bp | 2913463 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641315117 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001580847 |
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| Protein GI | 161525835 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.607509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT ACCCACTCTG GAAATATGTC GTGATGGTCG TGGCGCTCGC CATCGGCTTT
CTGTACACAT TGCCCAATTT CTTCGGCGAA GCGCCGGCGG TGCAGGTGTC GAGCGGCAAG
GCCACGGTCA AGCTCGACGC GAACACGCTG ACGCAGGTCG AAACGGCGCT CGCGGCCGCG
CAGATCAAGC CGGACGACGT CACCTTCGAG AACACGGCGA CCAACGCGAA CATCCGCGTG
CGCCTGAAGG ACACCGACAC GCAGCTGCGC GTGAAGGATC TGCTGCAAAA GACGCTGAAC
GCCGACCCGA ACGATCCGCA ATACGTGGTC GCGCTGAACC TGCAGAGCGC ATCGCCGCGC
TGGCTGACCG CGCTGCACGC GCTGCCGATG TATCTGGGCC TCGACCTGCG CGGCGGCGTC
CACTTCCTGC TCCAGGTCGA CATGACGGGC GCGCTCACGA AGAAGCTCGA CTCCGATGCG
GCCGACGCGC GCTCGCTGCT GCGCGACAAG AACATCCGCG ACGGCGGCGT GAGCCGCGTC
GATCAATCGG TCGTCGTCAA CTTCAGCGAC GCGCAGACGG CGGAAGACGC ACGCAAGGTG
CTCGCGTCGT CGATCACCGA ACTGCAATGG GCGACGCAGC CGGGCGGCGG CGGCACGCAA
GTCGTCGGCA CGTTCACGCC GGCCGTGCAG AAGGCCGTCG AAGACGCCGC GCTGAAGCAG
AACCTGACCA CGCTGCACAA CCGCGTGAAC GAACTCGGCG TGTCGGAGCC GATCCTGCAG
CAGCAAGGCA ACGACCGCAT CGTCGTCGAA CTGCCGGGCG TACAGGACAC CGCGAAGGCG
AAGGACATCA TCGGCCGCAC GGCGACGCTC GAAGCGCGCC TCGCCGATCC GATCAACACG
CATCCGAATC CGAACGACCC GGTGCCGCCG GGCGAGGAAC TGTTCACGCA GGGCAACCAG
GTGCCCGTGC TGCTGAAGAA GGACGTGATC TTCACCGGCG ACCGCATCAT CGACGCGTCG
GCCGGCTTCG ACGAGCATCA GCGTCCGTCG GTCAACATCC GCCTCGATTC GGCCGGCGGC
CGCGCGGTGC GCACCGTGTC GCGCGACAAC ATCGGCAAGC CGATGGCGAT GGTGCTGTTC
GAGAAGGGCA AGGGCGAAGT GCTGACGGTT GCGACGATCC AGTCGGAGCT CGGCGACCGC
TTCCAGATCA CGGGCCAGCC GACGCCGCAG GCCGCAGCCG ATCTCGCGCT GCTGCTGCGC
GCCGGCTCGC TCGCCGCGCC GATGGACATC ATCGAGGAAC GCACGATCGG CCCGAGCCTC
GGCGCCGACA ACATCAAGAT GGGCGTGCAC TCGGTGATCT GGGGCTTCTG CGCGATCGCG
GTGTTCATGA TCGCCTACTA CATGCTGTTC GGCGTGATCT CGGTGATCGG TCTGTCGGTC
AACCTGCTGC TGCTCGTCGC GGTGCTGTCG CTGATGCAGG CGACGCTGAC GCTGCCGGGC
ATCGCCGCTA TCGCGCTCGC ACTCGGTATG GCGATCGACT CGAACGTGCT GATCAACGAG
CGCGTGCGTG AGGAACTGCG CGCGGGCCAG CCGCCGCAGC TCGCGATCCA GGCCGGCTAC
GCGCACGCAT GGGCGACGAT TCTCGACTCG AACGTGACGA CGCTGATCGC CGGTCTCGCG
CTGCTCGCGT TCGGTTCGGG CCCGGTGCGC GCGTTCGCGA TCGTGCACTG CCTCGGCATC
CTGACGTCGA TGTTCTCCGC GGTGTTCTTC TCGCGCGGGA TCGTCAACCT CTGGTACGGC
AGCCGCAAGA AGCTGAAGTC GCTCGCGATC GGCCAGGTGT GGCGGCCGGA AGGCGCCGCA
GCGGCCGCGT CGTTCGCGGC GGCCGACGAA TCGACCGACA CCGCGCGCGC CGCGAAGCTC
GCCGCCCCGG CGAAGGGCAA CGCGCCGCGC GCCGGCAAGC CGCAGCTGCG CAACCGTGCG
CAGCCGGGCG TGTCGCCGAA GAAACCGGGC TCGACCCAAT AA
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| Protein sequence | MNRYPLWKYV VMVVALAIGF LYTLPNFFGE APAVQVSSGK ATVKLDANTL TQVETALAAA
QIKPDDVTFE NTATNANIRV RLKDTDTQLR VKDLLQKTLN ADPNDPQYVV ALNLQSASPR
WLTALHALPM YLGLDLRGGV HFLLQVDMTG ALTKKLDSDA ADARSLLRDK NIRDGGVSRV
DQSVVVNFSD AQTAEDARKV LASSITELQW ATQPGGGGTQ VVGTFTPAVQ KAVEDAALKQ
NLTTLHNRVN ELGVSEPILQ QQGNDRIVVE LPGVQDTAKA KDIIGRTATL EARLADPINT
HPNPNDPVPP GEELFTQGNQ VPVLLKKDVI FTGDRIIDAS AGFDEHQRPS VNIRLDSAGG
RAVRTVSRDN IGKPMAMVLF EKGKGEVLTV ATIQSELGDR FQITGQPTPQ AAADLALLLR
AGSLAAPMDI IEERTIGPSL GADNIKMGVH SVIWGFCAIA VFMIAYYMLF GVISVIGLSV
NLLLLVAVLS LMQATLTLPG IAAIALALGM AIDSNVLINE RVREELRAGQ PPQLAIQAGY
AHAWATILDS NVTTLIAGLA LLAFGSGPVR AFAIVHCLGI LTSMFSAVFF SRGIVNLWYG
SRKKLKSLAI GQVWRPEGAA AAASFAAADE STDTARAAKL AAPAKGNAPR AGKPQLRNRA
QPGVSPKKPG STQ
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