| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_1866 |
|---|
| Symbol | |
|---|
| ID | 5765621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010084 |
|---|
| Strand | + |
|---|
| Start bp | 2034991 |
|---|
| End bp | 2036649 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641314303 |
|---|
| Product | RND efflux system outer membrane lipoprotein |
|---|
| Protein accession | YP_001580050 |
|---|
| Protein GI | 161525038 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00193594 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTCTC CGGCAACAAA AGGGACGCTG GCACTGGCGG TTCTTGCAGT CTCATTAATA
ATGGCCGGCT GCGCGAGCAT GGGCGACAAC AAGCCTCAGT CGACCCGGAT CGACGCGAAC
GCGCTCGACG CCGGCGCCGA GATCCGCGCG GCCGACCGCG ATGCGGGCTG GCCCGCGTCG
GACTGGTGGC GCGCGTACGG CGACCCGCAG CTCGACGCGT GGATCGCCGC CGCGCAGGCC
GGCAACCCGA CGCTCGCGGC AGCGCAGGCC CGCGTGCGCG AAGCGCAGGC GATGGCGCGC
GTCGCTCGCT CGGCCGAATT GCCGCAAATC AACGGCAACC TGTCGCTGAT GCGCCAGCAC
TGGCCCGACA ACGTGTACTA CGGCCCGGGC CCGCTCGCGG ACACCGACAC CTGGAACAAC
ACCGGCACGC TCGGACTGTC GTATCACCTC GACCTGTGGG GCAAGGACAA GAACGCGACC
GAGCGCGCGC TCGACACCGC GCATGCGACG GCCGCCGACG CGCGCGCCGC GAAGCTCGAA
CTCGAAGTGA ACGTCGTGCG CGCGTACGTC GGCATGTCGA TGAACTACGC GCTGCTCGAT
CTCGCGCGCG AAACCTTCGA GCGCCAGCGC GCGCTCGCCG ATCTCGCGCA CAAGCGGCTG
CAGGCCGGCA TCGGCACGCA GCTCGAAGTG AGCCAGGCGG AATCGACGCT GCCCGACTAC
GAGCGCCAGA TCGACACCTA TGAAGAAGCG ATCCAGCTCG CGCGCCACCA GCTTGCCGCG
CTCGCCGGCA AGGGGCCGGG CGCCGGCGAC GCGATCCGGC GGCCGAAGCT GTCGCTCGAC
GCGCCGGCCG GCCTGCCGTC CGCGATGCCG GCCGACCTGC TCGGCCGCCG GCCCGACGTC
GTCGCGGCGC GCTGGATGGT CGACGCGCAG GCGCGCGGAA TCGACGTCGC GAAGGCCGCG
TTCTATCCGA ACATCGATCT GCTCGCGACC GTCGGCGGGT TCGGCGTGAC GGCGCCGTTT
ACCGACTTCC TGCGCGCGAT GAACGGCGGC TGGACGGCCG GCCCCGCGCT GTCGCTGCCG
ATCTTCGAAG GCGGCCGCCT GCGTGCGCAG CTCGGTGCCG CGAATGCCGG CTACGATCGC
GCGGTCGAGC ATTACAACCA GACGATCGTC GGTGCGCTGA AGGACATCGC CGACCAGGTC
GTGCGCATCC GCTCGCTCGA TACGCAGAAG AAGGACGCCG CGCGCTCGGT CGCCGCGAAC
GAGCGCAGCT ACCGGTTGTC GCGCGAAGGC TTCCGCCGCG GGCTGACCGA CTACGTGAAC
GTGCTGGTCG CGCAGCAGCA GCTGCTGCGT GCGCAGGAAA CGGCCGCGCG CATCGATGCC
GAACGTCTCG CCGCACACGC GGCGCTGATG GCGGCGCTCG GCGGCGGTGT CGAGACGGGC
GCCGATGTGC CTGACGAGCG CGCGGCGGCA GCCGGCGCGG TGCCGGCGAG CGCGCCGCAT
ACGGCCGGGC ATGCGCCGGC GGCGGCGGTG GGTGTACCGG TATCGGGTGT CCCGAAACCG
GCCGCAGCAT CGTCCGCCGC CGGCCCGCGA GGCGCGCTCG CGGCGAACGC CAACGCCAAT
GCCAACGCGG GCGCCGCGCC CGCAACGGCC GCCCGGTAA
|
|---|
| Protein sequence | MQSPATKGTL ALAVLAVSLI MAGCASMGDN KPQSTRIDAN ALDAGAEIRA ADRDAGWPAS
DWWRAYGDPQ LDAWIAAAQA GNPTLAAAQA RVREAQAMAR VARSAELPQI NGNLSLMRQH
WPDNVYYGPG PLADTDTWNN TGTLGLSYHL DLWGKDKNAT ERALDTAHAT AADARAAKLE
LEVNVVRAYV GMSMNYALLD LARETFERQR ALADLAHKRL QAGIGTQLEV SQAESTLPDY
ERQIDTYEEA IQLARHQLAA LAGKGPGAGD AIRRPKLSLD APAGLPSAMP ADLLGRRPDV
VAARWMVDAQ ARGIDVAKAA FYPNIDLLAT VGGFGVTAPF TDFLRAMNGG WTAGPALSLP
IFEGGRLRAQ LGAANAGYDR AVEHYNQTIV GALKDIADQV VRIRSLDTQK KDAARSVAAN
ERSYRLSREG FRRGLTDYVN VLVAQQQLLR AQETAARIDA ERLAAHAALM AALGGGVETG
ADVPDERAAA AGAVPASAPH TAGHAPAAAV GVPVSGVPKP AAASSAAGPR GALAANANAN
ANAGAAPATA AR
|
|---|
| |