Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_1328 |
Symbol | ispD |
ID | 5765943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010084 |
Strand | + |
Start bp | 1461060 |
End bp | 1461770 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641313755 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_001579513 |
Protein GI | 161524501 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.188334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000235677 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTCCCC GACTTTTCGC CCTGATTCCC TGTGCCGGCA CGGGCAGCCG TTCCGGCTCG GCCGTGCCGA AGCAATACCG GACGCTCGCC GGCCGCGCGC TGCTGCACTA CACGCTGGCC GCGTTCGACG CGTGCAGCGA ATTCGCGCAG ACGCTCGTCG TGCTCGCGCC CGACGACACG CACTTCGATG CGCGCCGCTT CGCGGGGCTG CGCTTCGCGG TGCGCCGCTG CGGCGGCGCG TCGCGGCAGG CGTCGGTGCT CAACGGGCTG CTCGGGCTCG CCGAATTCGG CGCGGCCGAT CACGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCGGGCA TCACGCCGGA GCTGATCCGC ACGCTGGTCG CGACGCTGAA GGACGATCCG GTCGGCGGCA TCGTCGCGCT GCCCGTCGCC GATACGCTCA AGCGCGTGCC GGCCGGCGGC GACGCGATCG CGCGCACCGA GCCGCGCGAC GCGCTCTGGC AGGCGCAGAC GCCGCAGATG TTTCGCATCG GCATGCTGCG CGACGCGATC CAGCGCGCGC AGCGCGAAGG GCACGACCTG ACCGACGAGG CGAGCGCGAT CGAATGGTCC GGCCATACGC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC GTATCCCGAA GATTTCGCGC TCGCGGAGGC GATTCTCGCG CGCGCCGCGA ACGCTTCGTG A
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Protein sequence | MTPRLFALIP CAGTGSRSGS AVPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVLAPDDT HFDARRFAGL RFAVRRCGGA SRQASVLNGL LGLAEFGAAD HDWVLVHDAA RPGITPELIR TLVATLKDDP VGGIVALPVA DTLKRVPAGG DAIARTEPRD ALWQAQTPQM FRIGMLRDAI QRAQREGHDL TDEASAIEWS GHTPRVVQGS LRNFKVTYPE DFALAEAILA RAANAS
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