| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_1303 |
|---|
| Symbol | ldcA |
|---|
| ID | 5765258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010084 |
|---|
| Strand | + |
|---|
| Start bp | 1431626 |
|---|
| End bp | 1432564 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641313730 |
|---|
| Product | L,D-carboxypeptidase A |
|---|
| Protein accession | YP_001579488 |
|---|
| Protein GI | 161524476 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0537897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTTC AGCCCGCCGC GTCCTACACC ATCCGCCTGC TTGCACCGTC CGGCTATCCG
CACGATCCGG ACGCGATCAA TCGCGCGCTC GAGCGGCTCA GCGTCGCGCA GCAGCGCATC
GAGAACATCG AGGCGACGCA GCGCCGCTTC CAGCGCTTCG GCGGCACCGA CGGCGAGCGC
GCCGGCGATC TGAACCGGCT GGCGGATCCG GCGCGGCCGC TGCCCGACAT CGCGCTCGCG
GTACGCGGCG GCTACGGCGC CGCACGAATC CTGCACGGTC TCGACTATCG CGGGCTCGAA
CGGCGGCTGC GCGATCAGCC GATCGCGCTC GTCGGCCACA GCGATTTCAC CGCGATCCAG
CTCGCGCTGT ACGCGAAGGC GCGGATCAAG AGCTTCGGCG GCCCGATGCT GTCCGCGGAC
TTCGGCGCGG AAACGCCGAG CGATTTCACG ATGCAGCACT TCTGGCAGAC GCTGACGCAG
CCCACCACGA CGATCGTCGC CGACACGCCG CAGGTGCAGC CCGTCAACGT GACGGGCACG
CTGTGGGGCG GCAACCTCGC GATCCTCGCG TCGCTGGTCG GCACGCCGTA CATGCCGGAC
ATCGAAGGCG GGATCCTCTT CATCGAAGAC GTCAACGAGC AGCCGTTCCG GATCGAACGG
ATGATCTACC AGCTGCATCT GTCGGGCGTG CTCGCGCGCC AGCAGGCGCT CGTGCTCGGC
CAGTTCACGG GCGCGCGGCC GTTCGAGTAC GACAACGGCT ACGACATGCA GGCGATGATC
GACCAGGTGC GCGCGGTGAT CGGCATTCCG GTCGTCACGG GGCTGCAGTT CGGCCACGTG
CCCGATCTGC TGACGCTGCC GTTCGGTGCG CGTGCGCAGC TCGTCGCGAA CGCGCACGGG
TTCCGGCTGA CGCTGTCGGA TTATCCGCAT CTCGGCTGA
|
|---|
| Protein sequence | MSFQPAASYT IRLLAPSGYP HDPDAINRAL ERLSVAQQRI ENIEATQRRF QRFGGTDGER
AGDLNRLADP ARPLPDIALA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ
LALYAKARIK SFGGPMLSAD FGAETPSDFT MQHFWQTLTQ PTTTIVADTP QVQPVNVTGT
LWGGNLAILA SLVGTPYMPD IEGGILFIED VNEQPFRIER MIYQLHLSGV LARQQALVLG
QFTGARPFEY DNGYDMQAMI DQVRAVIGIP VVTGLQFGHV PDLLTLPFGA RAQLVANAHG
FRLTLSDYPH LG
|
|---|
| |