Gene Pmob_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1956 
Symbol 
ID5757194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2165037 
End bp2165753 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content32% 
IMG OID641303152 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001568966 
Protein GI160903385 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.158323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA AGAAAAATTT TGAGCTTTTA TACGAAGGGA AAGCCAAAAA AGTATACAAG 
TTCGATGAGA AGAAATTGTT GATAGAATTC AAAGATGATG TGACAGCATT CAACGGATTA
AAAAAAGATC AAATCCTTAA CAAAGGAAAA ATCAACAAAG AAATTTCTAA GTTCTTTTTT
GAAATGCTGA ATAATCAAGG TATAAATACC CATTACATCA ACGATTACGA TGAAAACTCT
TTCGTTGCAA AATGGACAGA TTTAATTCCT CTTGAGGTTA TAATTAGAAA TTACACTGCC
GGAGGTTTTT GTAAGAGATA TGGAGTGAAA AAGGGATTGA TGTTTGATTA TCCTTTAGTT
GAATTTTCTT TGAAAAATGA CGAGTTAGGG GATCCGATGA TTGCCAAAGA TGCTATCCTT
CTTTTGAAAA TTACCACAGA AAACGTATTG GATGAAATCG CTTCTATTTC TAAAAAAGTC
AACAATATTT TAAGTGATTA TTTAAAATCT AAAGGAATTA TTTTGGTGGA TTTTAAATTA
GAGTTCGGAA TCAGTAAAAA CGATAACAAA GTTACGTTGA TCGATGAGAT CTCTCCTGAT
ACGTGCCGTT TTTGGGACGC AAATACTATG GAATCTCTTG ACAAAGATGT GTATAGGGAA
AATAAAGGGG ATCTTATCAA CGCCTACGAA GTATTACTTG GGAGGTTAGA TATATGA
 
Protein sequence
MEDKKNFELL YEGKAKKVYK FDEKKLLIEF KDDVTAFNGL KKDQILNKGK INKEISKFFF 
EMLNNQGINT HYINDYDENS FVAKWTDLIP LEVIIRNYTA GGFCKRYGVK KGLMFDYPLV
EFSLKNDELG DPMIAKDAIL LLKITTENVL DEIASISKKV NNILSDYLKS KGIILVDFKL
EFGISKNDNK VTLIDEISPD TCRFWDANTM ESLDKDVYRE NKGDLINAYE VLLGRLDI