Gene Pmob_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1947 
Symbol 
ID5756842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2157542 
End bp2158303 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content35% 
IMG OID641303143 
Productribonuclease III 
Protein accessionYP_001568957 
Protein GI160903376 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATG AGGATGATTT AAAATTAACC TTGCAAGAGG AACAAAATGT AAAAAAAGCA 
AAAAAGGAGC TCCTATTGCC ACCATGCGTG AAAGAGAGCG TGTTGTTCGA AGCGTTGTGT
CATAAATCAT ACGTTTTTGA CAACGAAAAT ATTCAAAGAA AACTTGATTC TAATGAAAGG
TTAGAATTTC TCGGAGATGC CGTTTTAGAG TTAGTTATCT CCGAGTTTCT TTACAATAAT
TATCACCTTT CTGAGGGAGA AATGTCAAAG GCGAGGGCTA TAATAGGAAG CGAAATTATT
TTAGCAGAAG TTGCTTTAAA GTTGAGGTTA GACGACTTTA TTTTTTTAAG TAAAGGTGAA
GACAAACAAG GTGGGCGAAC GAAAAAGTCA ATTTTATCTG ACACTATGGA GGCTTTGTTT
GCTTGTATTT ATCTTAGCTG CGGTTATGAA AAGGCAAAGA AGTATATTAT AAAAAACATG
AAGGAGTACA TCGAGAACGC TGTTGAAGGG AATATTTTTC TCGATTATAA GACGAAGTTA
CAAGAATTAA CTCAAGAAAA AACAAAAAAA TTGCCTGAAT ATGTGTTATT GAGTGCTTCT
GGGCCCTCAC ATATGAAAAG ATACAAGGTA GCAGTAAAAT TAGATGATGA GATACTAGGA
ATAGGCGAAG GCTTTTCAAA AAAATTTGCG GAACAATTAG CAGCAAAAAT TGCTTGTGAG
AAGTTTTTGG ATTCTATTGG TGGAAATGAT GTCGTTGATT AA
 
Protein sequence
MKHEDDLKLT LQEEQNVKKA KKELLLPPCV KESVLFEALC HKSYVFDNEN IQRKLDSNER 
LEFLGDAVLE LVISEFLYNN YHLSEGEMSK ARAIIGSEII LAEVALKLRL DDFIFLSKGE
DKQGGRTKKS ILSDTMEALF ACIYLSCGYE KAKKYIIKNM KEYIENAVEG NIFLDYKTKL
QELTQEKTKK LPEYVLLSAS GPSHMKRYKV AVKLDDEILG IGEGFSKKFA EQLAAKIACE
KFLDSIGGND VVD