Gene Pmob_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1946 
Symbol 
ID5756848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2155650 
End bp2157545 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content37% 
IMG OID641303142 
Producttransketolase 
Protein accessionYP_001568956 
Protein GI160903375 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA GTTTAAAAGA ACTAAAAAAC TTGTCGGTTA TCGCCAGAGG AGATATATTG 
AAGATGACCA CTGTGGCTAA TTCTGGTCAC CCCGCAGGGT CTATGTCTTC TATTGATATG
TTTTTATCGG TTTTAAATAG GGCAAATATA TTCCCAGATG ATCCGTTTAA TCCAGATAGA
GACAGGATCG TGGTTAGTCA TGGTCACACT TCACCAGGAT TCTATGTGGC TTTAGCAAGG
ATGGGCTTTG TAGACATAGA AGAAGTTATT TCAGGATTCA GATATGCTGG GAGCATATTT
GAAGGGCATG TTACCCGTGG AATACCTGGT GTTGAGTGGT CAACAGGCAA TTTAGGTCAA
GGTTTATCAG CTGGGATTGG AATGGCTTTG GCAGCAAAAA AGAGGGGAAA AGACTATAGA
GTTTACGTAT TTAGTAGTGA TGGAGAAAGC TCAAAAGGGC AAATTGCAGA AGCTCGAAGA
ACTGCCATAA AAGAAGGCTT AAATAACCTA ATAGTATTAC TTGATTACAA CGATATTCAA
ATATCTGGAA GAGCCAGAGA TATCTTATCA GTAAATATAG TTGGAGAATA TGAAGCGGCT
GGCTGGAACG TTATAGAAAT CGATGGACAC AATTTTGATC AAATCAATAA GGCTTTAGAA
GTAGCTGAAA ATGAACCATT AAGGCCAACT GTGATTGTAG CTAAGACGAT TATAGGGAAA
GGAGTTTCTT TTATGGAAAA CACCCCAACC TATCACGGTA AAGCACTCAC TAAAGAACAG
CTAAGTAAAG CTTTAGAAGA ATTAGGTTTA GAAAACGATG TGGAAAAGTA CATTGAAAAA
AGAAAAAATA TGGCTTTAAC TAGGGATAAA CTAAGTTATC CAAATATTGA ATTAAATGTT
GAGACAGGAC AACCTATAGT ATATGGCAAG GGAGAAAAGG TTGCCAATCG TAATGCTTTT
GGTAACGCTA TTGCTGATCT TGCGAAACTG AACATGGAGA ATTTTCCAGT AGTTGCGATC
GATTGTGATC TGAAACCATC CGTTAATTTG GAAAAATTTG AAAAAGTCAA TCCCGAAGGT
TATATTCAAA TTGGTATTGA GGAGCATAAC GCAGCCACCA TTGGAGGAGC ATTGTCCGTT
AGTGGAGCAT TAACTTTTTT CGCTGATTTT GGGGTATTTG GCTTGGATGA GGCATTTAAT
CAGCAAAGAT TAAACGATAT TAATCACACT AATTTAAAGA CTGTTGTCAC CCACTGTGGT
ATCGATGTTG GAGAAGATGG TAAGACTCAT CATGAAGTTA ATTATATTGG GATAGTCAGA
AGTTTATACC ATACTAAATT GATCGTACCT TGTGATGCCA ATCAAACTGA TAAAGCGATT
AGGTATGCTG CCAAAGTTCC TGGCAACTTT GTAATCGCTA TGGGAAGATC TAACTTGCCA
ATCTTGTTAG ATGAAGAGGG TAACGTTTAT TACAATAACG ATTATAACTT CGAGTATGGG
AAGTTGGATG TTTTTAGAAA AGGTAGAGAC CTAACAGTAT TCACATATGG AAGCTTCGCT
CATTTAGCGG TGGAAGCTGC TGATAAGTTG AAAGAAGAAG ATATACATAT TACAGTCATT
GGTGTACCGA CTCCTTTAGA TTTTGACCTT ACTCAAGTGA AAGAATACGT TGACAATACT
ATAGTATTAA CCTTAGAAGA TCACAACGTA GAAAATGGTT TGTCAAATGA ACTGTCAAAA
GCTATGATCA AAAATTCTAT GAAACCTTCT TATTTTGAAC CTATGGGATT AAAAGAATAT
GCACCGTCTG GAACAATCAA AGATTTGCTA AGGGTTCATG GATTTGATGT AGAATCGCTA
GTAAAAAAGA TGAAAGGATT AATTGAGAGC AAATGA
 
Protein sequence
MKKSLKELKN LSVIARGDIL KMTTVANSGH PAGSMSSIDM FLSVLNRANI FPDDPFNPDR 
DRIVVSHGHT SPGFYVALAR MGFVDIEEVI SGFRYAGSIF EGHVTRGIPG VEWSTGNLGQ
GLSAGIGMAL AAKKRGKDYR VYVFSSDGES SKGQIAEARR TAIKEGLNNL IVLLDYNDIQ
ISGRARDILS VNIVGEYEAA GWNVIEIDGH NFDQINKALE VAENEPLRPT VIVAKTIIGK
GVSFMENTPT YHGKALTKEQ LSKALEELGL ENDVEKYIEK RKNMALTRDK LSYPNIELNV
ETGQPIVYGK GEKVANRNAF GNAIADLAKL NMENFPVVAI DCDLKPSVNL EKFEKVNPEG
YIQIGIEEHN AATIGGALSV SGALTFFADF GVFGLDEAFN QQRLNDINHT NLKTVVTHCG
IDVGEDGKTH HEVNYIGIVR SLYHTKLIVP CDANQTDKAI RYAAKVPGNF VIAMGRSNLP
ILLDEEGNVY YNNDYNFEYG KLDVFRKGRD LTVFTYGSFA HLAVEAADKL KEEDIHITVI
GVPTPLDFDL TQVKEYVDNT IVLTLEDHNV ENGLSNELSK AMIKNSMKPS YFEPMGLKEY
APSGTIKDLL RVHGFDVESL VKKMKGLIES K