Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1946 |
Symbol | |
ID | 5756848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 2155650 |
End bp | 2157545 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641303142 |
Product | transketolase |
Protein accession | YP_001568956 |
Protein GI | 160903375 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAA GTTTAAAAGA ACTAAAAAAC TTGTCGGTTA TCGCCAGAGG AGATATATTG AAGATGACCA CTGTGGCTAA TTCTGGTCAC CCCGCAGGGT CTATGTCTTC TATTGATATG TTTTTATCGG TTTTAAATAG GGCAAATATA TTCCCAGATG ATCCGTTTAA TCCAGATAGA GACAGGATCG TGGTTAGTCA TGGTCACACT TCACCAGGAT TCTATGTGGC TTTAGCAAGG ATGGGCTTTG TAGACATAGA AGAAGTTATT TCAGGATTCA GATATGCTGG GAGCATATTT GAAGGGCATG TTACCCGTGG AATACCTGGT GTTGAGTGGT CAACAGGCAA TTTAGGTCAA GGTTTATCAG CTGGGATTGG AATGGCTTTG GCAGCAAAAA AGAGGGGAAA AGACTATAGA GTTTACGTAT TTAGTAGTGA TGGAGAAAGC TCAAAAGGGC AAATTGCAGA AGCTCGAAGA ACTGCCATAA AAGAAGGCTT AAATAACCTA ATAGTATTAC TTGATTACAA CGATATTCAA ATATCTGGAA GAGCCAGAGA TATCTTATCA GTAAATATAG TTGGAGAATA TGAAGCGGCT GGCTGGAACG TTATAGAAAT CGATGGACAC AATTTTGATC AAATCAATAA GGCTTTAGAA GTAGCTGAAA ATGAACCATT AAGGCCAACT GTGATTGTAG CTAAGACGAT TATAGGGAAA GGAGTTTCTT TTATGGAAAA CACCCCAACC TATCACGGTA AAGCACTCAC TAAAGAACAG CTAAGTAAAG CTTTAGAAGA ATTAGGTTTA GAAAACGATG TGGAAAAGTA CATTGAAAAA AGAAAAAATA TGGCTTTAAC TAGGGATAAA CTAAGTTATC CAAATATTGA ATTAAATGTT GAGACAGGAC AACCTATAGT ATATGGCAAG GGAGAAAAGG TTGCCAATCG TAATGCTTTT GGTAACGCTA TTGCTGATCT TGCGAAACTG AACATGGAGA ATTTTCCAGT AGTTGCGATC GATTGTGATC TGAAACCATC CGTTAATTTG GAAAAATTTG AAAAAGTCAA TCCCGAAGGT TATATTCAAA TTGGTATTGA GGAGCATAAC GCAGCCACCA TTGGAGGAGC ATTGTCCGTT AGTGGAGCAT TAACTTTTTT CGCTGATTTT GGGGTATTTG GCTTGGATGA GGCATTTAAT CAGCAAAGAT TAAACGATAT TAATCACACT AATTTAAAGA CTGTTGTCAC CCACTGTGGT ATCGATGTTG GAGAAGATGG TAAGACTCAT CATGAAGTTA ATTATATTGG GATAGTCAGA AGTTTATACC ATACTAAATT GATCGTACCT TGTGATGCCA ATCAAACTGA TAAAGCGATT AGGTATGCTG CCAAAGTTCC TGGCAACTTT GTAATCGCTA TGGGAAGATC TAACTTGCCA ATCTTGTTAG ATGAAGAGGG TAACGTTTAT TACAATAACG ATTATAACTT CGAGTATGGG AAGTTGGATG TTTTTAGAAA AGGTAGAGAC CTAACAGTAT TCACATATGG AAGCTTCGCT CATTTAGCGG TGGAAGCTGC TGATAAGTTG AAAGAAGAAG ATATACATAT TACAGTCATT GGTGTACCGA CTCCTTTAGA TTTTGACCTT ACTCAAGTGA AAGAATACGT TGACAATACT ATAGTATTAA CCTTAGAAGA TCACAACGTA GAAAATGGTT TGTCAAATGA ACTGTCAAAA GCTATGATCA AAAATTCTAT GAAACCTTCT TATTTTGAAC CTATGGGATT AAAAGAATAT GCACCGTCTG GAACAATCAA AGATTTGCTA AGGGTTCATG GATTTGATGT AGAATCGCTA GTAAAAAAGA TGAAAGGATT AATTGAGAGC AAATGA
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Protein sequence | MKKSLKELKN LSVIARGDIL KMTTVANSGH PAGSMSSIDM FLSVLNRANI FPDDPFNPDR DRIVVSHGHT SPGFYVALAR MGFVDIEEVI SGFRYAGSIF EGHVTRGIPG VEWSTGNLGQ GLSAGIGMAL AAKKRGKDYR VYVFSSDGES SKGQIAEARR TAIKEGLNNL IVLLDYNDIQ ISGRARDILS VNIVGEYEAA GWNVIEIDGH NFDQINKALE VAENEPLRPT VIVAKTIIGK GVSFMENTPT YHGKALTKEQ LSKALEELGL ENDVEKYIEK RKNMALTRDK LSYPNIELNV ETGQPIVYGK GEKVANRNAF GNAIADLAKL NMENFPVVAI DCDLKPSVNL EKFEKVNPEG YIQIGIEEHN AATIGGALSV SGALTFFADF GVFGLDEAFN QQRLNDINHT NLKTVVTHCG IDVGEDGKTH HEVNYIGIVR SLYHTKLIVP CDANQTDKAI RYAAKVPGNF VIAMGRSNLP ILLDEEGNVY YNNDYNFEYG KLDVFRKGRD LTVFTYGSFA HLAVEAADKL KEEDIHITVI GVPTPLDFDL TQVKEYVDNT IVLTLEDHNV ENGLSNELSK AMIKNSMKPS YFEPMGLKEY APSGTIKDLL RVHGFDVESL VKKMKGLIES K
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