Gene Pmob_1936 details

Gene Information

• Locus tag: Pmob_1936
• ID: 5757212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: +
• Start bp: 2141912
• End bp: 2147647
• Gene Length: 5736 bp
• Protein Length: 1911 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641303132
• Product: TPR repeat-containing protein
• Protein accession: YP_001568946
• Protein GI: 160903365

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.261102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAGA TTATTATAAA GCTTATTGGA ATCAGATGGC CTATTTTTAT TACACTAATT 
TTATCTATCC ATAAAAGAAA TAAAAGGCTC AAAGCATTGG ATAAGCTTGT GTGGAAAAAA 
TCATCTTTGC TTAAGCCGGA AGAAATGTTG AAAGAGCGTC CATTTGATCC ATACTATTAT 
CAAAGAGAAG AAGACAAAAT GATTAGTGAA AGTTTGAATA TTAAGGAAAA TATACTCATA 
AAGGGACCTC CATTAAGTGG TAAAACTAGA GCAGCCTATC AAGCTCTGAT TAATTTAAAG 
GCTCCATATA GTGTAATAAT CGCAGGATGC AATGGCATAG ACAAGGAGAT CTCACTCCCC 
CACTCTCTAG CGTTTTGGAG ACCAAAAATT CTGTTTATTG ATGATTTGCA TAGATTTGTA 
GATCAAGAAA ATTTTGAGCA TTTTTTTAGA ATCTCAAAAA AGAACAATGT GTTTATTATT 
GCTACTTGTC GCTCAGGATT AGAAGAAAAA AAAGTAAAAC AGAAGATGCT AAGTAAGAAT 
ATAAATTCAG AAACTATATT CGAGAGGGAG ATAGAGCTTA ACAAAATACC AACGGCGGAA 
GGGAAAAAGA TTGCCTCTGA AGTTAATAAA AAGTGGGAGG AAATTAAATT TGATGGAACT 
ATAGGATCTA TTTTCATGCC TTTGGATAAG TTGGAAAAAA GATTTGAAAC TTTTGAATCA 
GTTGAGAAGA ATATTTTAAA AGCGCTAAAA AAGCTATACA TATGTGGATG TTATAAAGGA 
AACTTGCTCT TTCCTCTAGA ATGGGTGAAA ATCGTCTCTA AAAAAGATGG TTTAAAAATA 
AAAGATTTTG AATGGACTGA TCATATCAAG ACTCTAGAAG AGAAAGGATT CGTTAAATTA 
ATAAAAGATA ATCAAATTTG GGTTGACGAG GCATATTTAG ACTATGTAAT TAAACTAGAA 
ACAACAATAA CAGAATTAAA CGTATTTGAA ATTATGGTCT CAGCTTTTTC AAAGGTTCCT 
GACGTATTAT TTAAAATTAA AAACAGAGCA CAGGAATTAG CTGATATTCA ATTAGAAGAA 
GAAAAATCAA AGTATTTGAA AGTAGTAATC AAAACCTACA AAGAAACTCT TAAAGAATAT 
ACTCTTGAGC ATTTTCCAGA AGAGTATGCA ATGGTGCAGA AAAATCTTGG TGATACATAC 
ACCAAACTTG CTAAAATAGA AGCAACATCA GAGAATGGGG AGAATGCAAT CAAAGCCTAC 
GAAGAAACCC TTAAGGTGTA TACTCTTGAG CGATTCCCAA TAGATTATGC AATAGTACAA 
AAAAATCTTG GTGATGCATA TACCAAGCTT GCCGGGCTTG AAAAGGCATC AGAGAATTGT 
AAGAATTCAA TCAAATCCTA CAAAAAAACC CTTAAGGTGT ATACTCTTGA GCGATTCCCA 
ATAGATTATG CAATAGTACA AAAAAACCTT GGCGATGCAT ACACCAGATT GGCAAAAACT 
GAAACGACAT CAGAGAATTG CAAGAATGCA GTTAAAGCCT ACGAAGAAGC ACTTAAAGTG 
TATACTCTTG AGCGATTTCC AGAAGACTAT GAAATGATTC AAATAAATCT TGTAGATGCA 
TACACTAAGC TTGCTGGGGT AGAGGCAACA AAAGGGGATT GGGAGAATGT AATAAAAGCT 
TACGAGGAAG CTCTTAAAGT TCGGATTCTT AAACGGTTTC CAGAAGATTA TGCAATCACA 
CAAAAAAATC TTGTGGATGC ATACATTAAG CTTGCTAAAA TAGAAACAAC ATCAAGGAAA 
TGGAAAAATG CAATCAAAAC TTATGAAGGA GCCCTGAAAG TTGGGATTCT TGAGCAATTT 
CCTGAAAAGT ATGCAATCAC ACAAAAAAAT CTTGTGAATG CATACACTAG ACTGGCAAAA 
GCTGAAACGA CTTCAGAGAA TTGCAAGAAT GCAGTCAAAG CCTGCGAAGA AGCACTGAAG 
GTTGAAATTT TAGAGCGATT CCCAGAAGAG TATGAAATGA TTCAAATAAA TCTTGTGGAT 
TCATACACCA AGCTTGCTGA GGTAGAGGCG ACAAAAGGGA ATTGGGAGAA TGCAATAAAA 
GCCTACGAGG AAGCGCTAAA AGTTGGGATT CTTGAGCAAT TTCCTGAAAA GTATGCAATC 
ACACAAAAAA ATCTTGTGGA TGCATACACT AGGCTGGCAA AAATTGAAGC GATATCAGGG 
AATTCCAAGA ATGCAATAAA AGCCTACGAG GAAGCGCTAA AAGTTGGGGT TCTTGAGCAA 
TTTCCTGAAG AGTATGCAAT CACACAAAAA AATCTTGGGG ATGCTTACGC CAGACTTGGA 
TGGGTTGATG CGACATCAGA GAATTGCAAG AATGCTATCA AAGCCTATGA AGAAGCAATG 
AAGGTTGGGA GTCTTAAAGG AGACACGGGG GAGTATGCAA TCACACAAAA AAATCTTGTG 
GATGCATACA CCAGCCTTGC TAAAATTGAA AAGGCATCAG AGGATTGGAA GAAAGCAATC 
AAAGCTTATG AAGACGCACT GAAAGTTGGG ATTCTTGAGC GATTCCCAGA AGAGTATGCA 
ATGGTGCAAA AAAACCTTGG AGATGTGTAC AACAACCTTG TTAAAATAGA AAAGACACCA 
GAGAATTGGG AAAGAGAAAT CAAAGCCTAT GAAGGAGCAT TGAAAGTTGG GAGTCTTAAG 
CTATCTTCGC TAGAATATGC AATGATTCAA AAAAACCTAG GGGATGCATA CTCCCAACTG 
GCTAAACTAC GAACGACATC AAGGAATTGG GAGAATGCAA TCAAAGCCTA TGAAGAAGCT 
CTGAAAGTTG GGATTCTTGA GCGATTCCCA GAAGAGTATG CAATGGTGCA AAAAAACCTT 
GGAGATGTGT ACAACAACCT TGTTAAAATA GAAAAGACAC CAGAGAATTG GGAAAGAGAA 
ATCAAAGCCT ATGAAGGAGC ATTGAAAGTT GGGATTCTTA AGCTATCTTC GCAAGAGTAT 
GCAATGATTC AAAAAAACCT AGGGGATGCA TACTCCCAAC TGGCTAAACT ACGAACGACA 
TCAAGGAATT GGGAGAATGC AATCAAAGCC TATGAAGAAG CTCTGAAAGT TCGAATTCTT 
AAACGGTTTC CAGAAGATTA TGCAATGGTT CAAAAAGGTC TTGTGGATGC ATACATTAAG 
CTTGCTAAAA TAGAAACATC ATCAAGGAAT TGGAAAAATG CAATCAAAGA TTATGAAGAA 
GCGCTGAAAG TTGGGATTCT TGAGCGATTC CCGGAGGAAT ATGCAATGGT TCAAAAAAAC 
CTAGGGGAAG CATACAACAA CCTTGTTAAA ATAGAAAAGA CACCAGAGAA TTGGGAGAGA 
GAAATCAGAG CCTATGAAGA AGCATTGAAG GTTGGGATTC TTGAGCGATC TTCAGAAGAG 
TATGCAATGG TTCAAAAAAA CCTAGGGGAT GCATACATCA AGCTTGCTGG AGTAAAGGCA 
ACAAAAGGGA ATTGGGGGGC GGCAATAAAA GCCTATGAAG GAGCCTTGAG AGTTGGGATT 
CCTGAGCTAT CGCCGGAAGA GTATGCAATC ACACAAAAAA ATCTTGGGGA TGTATACTTC 
CAACTGGCTA AACTACAAAC GACATCAGAA AATTGGAAGA AAGCAATCAG AGTCTATGAA 
GGAGTTTTGA AAGATGGGAT TCTTGAGCGA TTCCCGGAAG AATATGCAAT CACACAAAAA 
AATCTTGTGG ATGCATTCAC CAGCCTTGCT AAAATTGAAA AGGCATCAGA GGATTGGAAG 
AATGCAATCA AAGCCTATGA AGACGCACTG AAAGTTGGGA TTCTTGAACG ATTCCCAGAA 
GAGTATGCAA TGGTGCAAAA AAACCTTGGA GATGTGTACA ACAACCTTGT TAAAATAGAA 
AAGACACCAG AGAATTGGGA AAGAGAAATC AAAGCCTATG AAGGAGCATT GAAAGTTGGG 
AGTCTTAAGC TATCTTCGCT AGAATATGCA ATGATTCAAA AAAACCTAGG GGATGCATAC 
TCCCAACTGG CTAAACTACG AACGACATCA AGGAATTGGG AGAATGCAAT CAAAGCCTAT 
GAAGAAGCTC TGAAAGTTGG GATTCTTGAG CGATTCCCAG AAGAGTATGC AATGGTGCAA 
AAAAACCTTG GAGATGTGTA CAACAGCCTT GCTAAAATAG AAAAGACATC AGAAAATTGG 
GAGAATGCAA TCGAAGCCTA TGAAGGAGCC TTGAAAGTTG AGAGTCTTAA GCGATCTTCG 
CGGTGGTATG CCAAAGCGCA AAAAAGTCTT GTAGATGCCT ATATCAAACT AGCTGAGGTA 
GAGGTAACAA AAGGGAATTG GGGGAATGCA GTCAAAGCCT ATGAAGGAAC CTTGAGGGTT 
GAGATTCTTA AGCTATATTC GGAAGAATAT ACAATGGTTC AAAAAGGTCT TGTGGATGTC 
TATATCAAAC TAGCTGAGGT AGAGGTAACA AAAGGGAATT GGGGGAATGC AGTCAAAGCC 
TATGAAGGAG CCTTGAAAGT TGGTATTCTT GAGGGATCGC CGGAAAAGTA TGCAAAGGTT 
CAAAAAGGGC TTGTGGATGT CTATATCAAA CTAGCTGAGG TAGAGGTAAC AAAAGGGAAT 
TGGGGGAATG CAGTCAAAGC CTATGAAGGA GCCTTGAAAG TTGGTATTCT TGAGGGATCG 
CCGGAAGAGT ATGCAAAGGT TCAAAAAGGT CTTGTGGATG TCTATATCAA ACTAGCTGAG 
GTAGAGGTAA CAAAAGGGAA TTGGGGGAAT GCAGTCAAAG CCTATGAAGG AGCCTTGAAA 
GTTGGTATTC TTGAGGGATC GCCGGAAGAG TATGCAATGG TTCAAAAAGG TCTTGTGGAT 
GTCTATATCA AACTTGCTGA GGTAAAGGCA ACAAAAGGGA ATTGGAGGGC GGCAATAAAA 
GCCTATGAAG GAGCCTTGAA AGTTGGTATT CTTGAGCTAT CGCCGGAAGA GTATGCAATC 
ACAAAAAAAA ATCTTGGGGA TGCGTACATC AAACTTGTCG ACGTTGAAAC GACATCAGAG 
AATTGTGAGA AGGCAATTAA AGCCTATGAG GAAGCACTTA AGGTGTATAT TCCTCAACGG 
TACTCAAGTG ATTACGCAAT GGTTAAAAAA AACCTAGGGG ATGCATACTC CCAACTGGCA 
AAACTACAAA TGACATCAGG GAATTGGTGG AATGCAATCA AAGCTTATGA AGAAGCACTT 
AAGGTGTATA TTCCTCAACG GGACTCAAGA GATTACGCAA TGGTTAAAAA AAACCTAGGG 
GATGCATACT CCCAACTGGC AAAACTACAA ATGACATCAG GGAATTGGTG GAATGCAATC 
AAAGCTTATG AAGAAGCACT TAAGGTGTAT ATTCCTCAAC GGGACTCAAG AGATTACGCA 
ATAGTGCAAA AAAACCTGGG GGATGCGTAC ATCAAGCTTG CCGACGTTGA AACGACATCA 
GAGAATTTTG AGAATGCAAT CAAAGCCTAT GAAGAAGCAC TTAAGGTGTA TACTCCTCAA 
CAGTATCAAG GAGATTATGC AACGGTTAAA GAAAACCTTG GGGATGCATA TTCCCAACTA 
GCTAAACTAG AAGCTGCATC GGAAAATTGG AAGAATGCAC TCAAAGCATA CAAGGAAGCA 
CTTAAAATAT TTAAAGAAGA AAAATTTCCT TGGGAAATAA TTGATTTAAT AGAGTCGAAA 
ATTTCCAAAG TGCAGGAAAT TTTATATGAA AAATAG 

 

Protein sequence

MFKIIIKLIG IRWPIFITLI LSIHKRNKRL KALDKLVWKK SSLLKPEEML KERPFDPYYY 
QREEDKMISE SLNIKENILI KGPPLSGKTR AAYQALINLK APYSVIIAGC NGIDKEISLP 
HSLAFWRPKI LFIDDLHRFV DQENFEHFFR ISKKNNVFII ATCRSGLEEK KVKQKMLSKN 
INSETIFERE IELNKIPTAE GKKIASEVNK KWEEIKFDGT IGSIFMPLDK LEKRFETFES 
VEKNILKALK KLYICGCYKG NLLFPLEWVK IVSKKDGLKI KDFEWTDHIK TLEEKGFVKL 
IKDNQIWVDE AYLDYVIKLE TTITELNVFE IMVSAFSKVP DVLFKIKNRA QELADIQLEE 
EKSKYLKVVI KTYKETLKEY TLEHFPEEYA MVQKNLGDTY TKLAKIEATS ENGENAIKAY 
EETLKVYTLE RFPIDYAIVQ KNLGDAYTKL AGLEKASENC KNSIKSYKKT LKVYTLERFP 
IDYAIVQKNL GDAYTRLAKT ETTSENCKNA VKAYEEALKV YTLERFPEDY EMIQINLVDA 
YTKLAGVEAT KGDWENVIKA YEEALKVRIL KRFPEDYAIT QKNLVDAYIK LAKIETTSRK 
WKNAIKTYEG ALKVGILEQF PEKYAITQKN LVNAYTRLAK AETTSENCKN AVKACEEALK 
VEILERFPEE YEMIQINLVD SYTKLAEVEA TKGNWENAIK AYEEALKVGI LEQFPEKYAI 
TQKNLVDAYT RLAKIEAISG NSKNAIKAYE EALKVGVLEQ FPEEYAITQK NLGDAYARLG 
WVDATSENCK NAIKAYEEAM KVGSLKGDTG EYAITQKNLV DAYTSLAKIE KASEDWKKAI 
KAYEDALKVG ILERFPEEYA MVQKNLGDVY NNLVKIEKTP ENWEREIKAY EGALKVGSLK 
LSSLEYAMIQ KNLGDAYSQL AKLRTTSRNW ENAIKAYEEA LKVGILERFP EEYAMVQKNL 
GDVYNNLVKI EKTPENWERE IKAYEGALKV GILKLSSQEY AMIQKNLGDA YSQLAKLRTT 
SRNWENAIKA YEEALKVRIL KRFPEDYAMV QKGLVDAYIK LAKIETSSRN WKNAIKDYEE 
ALKVGILERF PEEYAMVQKN LGEAYNNLVK IEKTPENWER EIRAYEEALK VGILERSSEE 
YAMVQKNLGD AYIKLAGVKA TKGNWGAAIK AYEGALRVGI PELSPEEYAI TQKNLGDVYF 
QLAKLQTTSE NWKKAIRVYE GVLKDGILER FPEEYAITQK NLVDAFTSLA KIEKASEDWK 
NAIKAYEDAL KVGILERFPE EYAMVQKNLG DVYNNLVKIE KTPENWEREI KAYEGALKVG 
SLKLSSLEYA MIQKNLGDAY SQLAKLRTTS RNWENAIKAY EEALKVGILE RFPEEYAMVQ 
KNLGDVYNSL AKIEKTSENW ENAIEAYEGA LKVESLKRSS RWYAKAQKSL VDAYIKLAEV 
EVTKGNWGNA VKAYEGTLRV EILKLYSEEY TMVQKGLVDV YIKLAEVEVT KGNWGNAVKA 
YEGALKVGIL EGSPEKYAKV QKGLVDVYIK LAEVEVTKGN WGNAVKAYEG ALKVGILEGS 
PEEYAKVQKG LVDVYIKLAE VEVTKGNWGN AVKAYEGALK VGILEGSPEE YAMVQKGLVD 
VYIKLAEVKA TKGNWRAAIK AYEGALKVGI LELSPEEYAI TKKNLGDAYI KLVDVETTSE 
NCEKAIKAYE EALKVYIPQR YSSDYAMVKK NLGDAYSQLA KLQMTSGNWW NAIKAYEEAL 
KVYIPQRDSR DYAMVKKNLG DAYSQLAKLQ MTSGNWWNAI KAYEEALKVY IPQRDSRDYA 
IVQKNLGDAY IKLADVETTS ENFENAIKAY EEALKVYTPQ QYQGDYATVK ENLGDAYSQL 
AKLEAASENW KNALKAYKEA LKIFKEEKFP WEIIDLIESK ISKVQEILYE K