Gene Pmob_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1933 
Symbol 
ID5757217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2138474 
End bp2140612 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content32% 
IMG OID641303129 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001568943 
Protein GI160903362 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATTG AATCGAAAAG TTATGAGAAA GAAGTAGAAA AGCTATTAAA TGTGAAGCTT 
ACTAAAAAAG AAAAAGAAAG AATAAAAATT GCCTATGAAT TGGCTGAAAC ATCTCATAGT
GGTCAATTTA GGGATTCTGG TGAGGAATTT TTTGAGCATC CAAAAAGTGT TGGATTGATA
CTCGCAGGTT TAAAAATGGA TGTGGATACT ATTATAGCTG GTCTTTTGCA CGATGTAGTT
GAAGATTGTG GTGTTTCAAT AGATAAAATA AAAGATCTTT TTGGGATCGA TGTTGCTAAT
ATAGTTTCAG GTGTCACTAA GATTAGCAAT TTAAAGCTCA ATGAGCGGCT AAACGAAAAT
GACATGAAAT CTTTAGAAAA AGTAGAAACT ATCAGAAAGA TGCTTTTTGC TATGTCTGAG
GATATAAGAG TCATAATCGT TAAATTGGCA GATAGATTAC ATAACATGAG AACTTTAGAA
TTCGTCGATA GAAAAAAGCA GATAGCCAAG GCCGACGAAA CTTTAAAAAT ATACGCACCT
ATTGCCCATA GATTGGGTAT CTATAAGATG AAGGAAGAGT TGGAAGATTT GTCTTTTCGG
TATTTGTATC CTGAGACATA TTTTGATCTA AAGACGAAAA TCGAGGAAAA AATTAGACTT
GGGCAAAATC GATTGAACGA ATACGCGCAG ATTATTAAAC AAGAGCTTGA TAATCAGAAA
ATTAAAGCGA CGGTTGAAGG TCGCTCTAAG CATTTATATA GTATATGGGA TAAGATGATT
CGAAAAGGAA AAACTTTAGA TGAAATATAT GACTACATAG CTCTTAGGAT AATTACTGAA
GATCAGAATA AATGCTATGC TGTGTTGGGA ATAATTCATT CTATTTGGTC CCCTGTTCCA
GGTAGAATAA AAGATTACAT TGCAACCCCT AAATTCAATG GTTATAAATC CCTGCATACC
ACCGTTATAA CCCATAAAGG AGATCCTTTG GAAATTCAAA TTCGAGATTG GGAAATGCAT
GAAGAAGCTG AATACGGCTT AGCTGCCCAT TGGGTCTATA AAGAGGGTGT TAGTCAGGAA
AAATTGAAAT TTTTAACTGA TCTTATGGAA TTACATAGGT ATATTGCTCA AAATGCTTTT
GAATTGAAAG ATATCGAAAC GAATCTTCTT TCAAAAGAAA CTTTTGTATT TACACCAAAG
GGAGAAATAA TCCATTTACC AAGAGGAGCA ACACCTATTG ATTTTGCTTT TGCTATTCAT
ACTGAGGTTG GCAATCATTT TTCTGGAGCG AAAGTCAACG GTAAATTAGT CCCTATTTCA
TACAAATTAC AGACTGGGGA CATAGTAGAG ATATTGATCA ATAGGAATTT TCAAGGACCT
AGTATTGATT GGTTAAAATA TGCTCATTCT CCCAAGACTA TATCAAAGAT AAAAAAATAT
TACAGGCAAA AAAACGAAGT GGAGTTAATA GAAAGAGGCA AAGACAAGTT TAGAGAGCTG
TCTAAAAAAC TTAATTTTTC TATGGATGAA ATTCTCGAGA AATTGAAAGA AATAGGATTT
TATATTAAAT ACAATATAAA AAGTGACGAC GAATTTTTCA TTAAGTTATC TTTAGAAGAT
ATCAGTATTA ATACTATTAG AAATATTTTT ACCCTCAATG AAAAAGAAGA GGAAACAATC
ACTACGGTCG AAAAAACTAA TTCAAGTAGG AAAGGGATCT CCGTTCTTGT TGATGGTGAA
GAAGGAGTCG AAAGTTATTT TGCTAAATGT TGTATGCCTG TTCCAGGTGA TGAAATTATT
GGTGTGATAA CCCGTAGAGG CATCGGCATA CATAGAAAAG ATTGTAATAA TATTCAGGAT
ATTGATGATA GTAAGAAGGT AAATGTTGAG TGGAACGAAC TCAATCAAAA CAAATTTTCT
ACGGTATTAA TGATTGATGT GGAAAGTAAA AATGTCTTAA ATAACGTTAG AAATGTTATA
AATAATGAAG GGGGACATAT TGAAAAATTC GAAATGACAA ATAATTCTAA TTATCTTAAT
ATTAGGATAT ATTTAGCTGT TCAGAATTTA AAGCATCTGA GTCTTTTGAG TAATAAATTG
AAAAATTCTA AAGGTGTTTA TTCTGTTAGG AGGGTATAA
 
Protein sequence
MLIESKSYEK EVEKLLNVKL TKKEKERIKI AYELAETSHS GQFRDSGEEF FEHPKSVGLI 
LAGLKMDVDT IIAGLLHDVV EDCGVSIDKI KDLFGIDVAN IVSGVTKISN LKLNERLNEN
DMKSLEKVET IRKMLFAMSE DIRVIIVKLA DRLHNMRTLE FVDRKKQIAK ADETLKIYAP
IAHRLGIYKM KEELEDLSFR YLYPETYFDL KTKIEEKIRL GQNRLNEYAQ IIKQELDNQK
IKATVEGRSK HLYSIWDKMI RKGKTLDEIY DYIALRIITE DQNKCYAVLG IIHSIWSPVP
GRIKDYIATP KFNGYKSLHT TVITHKGDPL EIQIRDWEMH EEAEYGLAAH WVYKEGVSQE
KLKFLTDLME LHRYIAQNAF ELKDIETNLL SKETFVFTPK GEIIHLPRGA TPIDFAFAIH
TEVGNHFSGA KVNGKLVPIS YKLQTGDIVE ILINRNFQGP SIDWLKYAHS PKTISKIKKY
YRQKNEVELI ERGKDKFREL SKKLNFSMDE ILEKLKEIGF YIKYNIKSDD EFFIKLSLED
ISINTIRNIF TLNEKEEETI TTVEKTNSSR KGISVLVDGE EGVESYFAKC CMPVPGDEII
GVITRRGIGI HRKDCNNIQD IDDSKKVNVE WNELNQNKFS TVLMIDVESK NVLNNVRNVI
NNEGGHIEKF EMTNNSNYLN IRIYLAVQNL KHLSLLSNKL KNSKGVYSVR RV