| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1922 |
|---|
| Symbol | |
|---|
| ID | 5757228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 2127848 |
|---|
| End bp | 2128681 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641303118 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001568932 |
|---|
| Protein GI | 160903351 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.454551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAG AAAAAACAAA TAAAACTTCG CTTACAATCT ATTACATTAT ATTGGCTTTA
TTCACAATAT TTTACGTGCT GCCGTTTTAT GTAACTCTAA GCACCTCTTT TAAACCGTTT
GAAGAAGTCT CTATATCAAA CATGTGGAAA CTTCCAACTA AGATTTCTTT TGAAGGTTTC
AAAGAGGCGT TTGCAAAGTT AGGGCCGAAT CTAAAAAACA GTTTTTATCT TACAATACCA
GCAACACTAA TATCTGCAAT GATTGGTTCT ATAAATGGCT TTGCCCTTTC AAAATTAAGA
TTCAAATATT CAAATATTAT TTTTGCACTC ATACTATTTG GCATGTTCAT ACCTTATCAG
AGCGTATTAT TTCCACTGAT ACAATTTTTT CAACTAATAG GCTTATACGG TACAATACCA
GCATTAATAA TAACCCATGT TATATACGGA ATACCGATCA CAACATTAAT GTTTAAAAAT
TACTATGAGG AAATCCCAAA CGAATTAGTA GAAGCATCAT CTGTGGATGG AGCAAACATA
TGGCAATCCT ATACAAAGAT TCTTTTACCT ATATCTATAC CTGGTTTCGT AGTTGTTATA
ATATGGCAGT TCACTAACAT ATGGAATGAA TTCTTATTTG CAGTAACGAT AACTAGTGAC
CCAACGAAAC AGCCCATAAC GGTGGCGTTA GTCAATTTGG CTGGCAGTCA GGTCGTTCAA
TGGAATGTTC AAATGGCAGG AGCTTTAATA GCTGCCCTTC CTACACTCAT CGTTTACATG
ATATTGGGAA GGTATTTTGT AAGAGGCTTG CTCGCCGGTT CAGTCAAAGG ATAA
|
|---|
| Protein sequence | MMAEKTNKTS LTIYYIILAL FTIFYVLPFY VTLSTSFKPF EEVSISNMWK LPTKISFEGF
KEAFAKLGPN LKNSFYLTIP ATLISAMIGS INGFALSKLR FKYSNIIFAL ILFGMFIPYQ
SVLFPLIQFF QLIGLYGTIP ALIITHVIYG IPITTLMFKN YYEEIPNELV EASSVDGANI
WQSYTKILLP ISIPGFVVVI IWQFTNIWNE FLFAVTITSD PTKQPITVAL VNLAGSQVVQ
WNVQMAGALI AALPTLIVYM ILGRYFVRGL LAGSVKG
|
|---|
| |