| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1898 |
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| Symbol | |
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| ID | 5758094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | + |
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| Start bp | 2099998 |
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| End bp | 2102943 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641303093 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001568908 |
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| Protein GI | 160903327 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTGG GAGATGAAAA ATATTCTGCT CAGGATCCAA TTATAAAATA CGTACAAGAA
GAATCTGCTG AATATGGATC ATCAGAAGGA AGCAAGGTTT TTCTGAACCT TGGTTGGGAA
TACGTCAAAC CTGATGAAGC CTTGAGGCTA AAAGGTGGAG AAAAAGGCTT AATATTCAAA
GATGTATTTA TAAAGCAACT TCAAAAACTC AATCCTGGGT TTATGGACCA TCTTTCAGCA
GAAAAAATAT TAAAAGATCT TGAAAGGATT CCACCCAATA TACAAGGTAA TTTGATAATC
TGGGAATTTT TAAAAGGACT TAAAACTATA TTTGTACCCA ATGAAAAAAG AGAAAGAAAC
GTAACTTTTT TAGATACCTA CGAAATAGAT AGAAACATAT TCCAAGTTAC CGATGAATTT
ACATTTACAA ATGGGAGCGA AACAATAAGG GCAGATGTGG TGTTTCTTAT TAATGGAGTC
CCGTTTATAC TCATAGAAAC GAAAGCACCT CATAGAACGG ATCCGCTTAA TGAAGCCTAT
AAGCAAGTAA AAAGGTATCA TCAGGAAGCG CCAGAACTTT TGGCTATTTT ACAAATCTTT
GGTTTGATAG ATGTGATTCG CTTTTATTAC GGTGCAACTT GGAATCTTTC AGGAGGGTCT
CTCTTCGAAT GGAAGGATGA ATTAGATCAA GGTTATGAAA CTTTAATTAA AACTTTTTTT
GATAGAAAAA GAGTAATAAA GATACTTACT GATTTTATTC TTTTTACAAA GCAAGATGAA
GAGCTTAAAA AAGTTGTTTT AAGGCCTCAT CAAATGAAAG CCGTTGATAA GATAATTGAA
AGGGCTAAAG ATCCTTCAAA GCAACGTGGG TTAATTTGGC ATACTCAAGG TTCTGGTAAA
ACTTACACTA TGATTGTAAC GGCGAAAAAA ATAATAGAAG ATCCCTTTTT TGAAAATCCG
ACAGTAATTA TGCTTGTTGA TAGAAACGAA CTTGAATCAC AGTTGTTCAG CAATCTGAAA
TCTGTTGGTA TTGAAAATGT AGAGGTTGTA GAAAGTAAAA AACATCTAAG GCAGCTTCTT
AAAACCGATA AAAGAGGTTT AATTGTTAGT ATGATTCATA AGTTTGATAA TATTCCTGCT
GATTTAAATC TACGGAAAAA TATTTTTGTT TTAGTAGATG AAGCCCATAG GAGTACGGGT
GGGAAGCTTG GTACATTTTT AGAAGGAGCT TTACCAAATG CAACTTATAT AGGCTTTACT
GGTACTCCCA TAGATAAGAC AAATTATGGG AAAGGAACGT TTGTTACATT TGGTAAAGAT
GATCCCCCTA AAGGATACCT TGATAAATAC AGCATATCAG AATCGATTAA AGATGGCACT
ACCGTTCCCT TGTATTATAC GTTTGCGCCA AATAAAATGA TGATTGAAAA AGATGTTCTT
GAGAAAGAAT TTCTGACACT GGCAGAGACA CAAGGGGTTA GCGATGTAGA AGAGCTTAAC
AAGGTTTTAG AAAAAGCCGT AAAACTTAAA AATATGCTAA AAAACAATGA TAGAGTTCAG
TTGATATCAA AATTTGTAGC AAAGCATTTT AAAGAGTTTA TTGAACCAAT GGGTTTCAAA
GCATTTCTTG TCGCTGTTGA TAGAGAAGCA TGTGCATTGT ACAAGGAAGA ATTAGATAAA
CATCTACCTC CTGAATACTC TAAAGTTGTA TATAGTCAGA GTCAAAACGA TCCTCCGCAA
ATGACGAAAT ATTATTTATC TGAAATGGAA GAGAAAAAAG TTAGAGAGAA CTTTAAAAAG
CCTGGGGAGC TACCGAAAAT TTTAATCGTA ACCGAAAAAT TATTAACTGG GTTTGATGCG
CCGATTCTTT ATTGTATGTA TTTAGATAAA CCGATGAGAG ATCACGTTCT TTTACAGGCT
ATAGCCAGAA TCAATAGACC TTACAAGAAG GAAGAAAAAG ATAAAAAGAA CGGACTTGTT
GTCGATTTTG TTGGAATTTT TAATAATTTA GAAAAGGCAC TTGCTTTTGA TTCTGAGGAT
ATAGAAGGGG TAATCGAAGA TATTGAACTT TTAAAGGAAG AATTTGCTCA ACAAATGGAA
ATCGGCAAAG AGAAATATCT TTCTATCGTT GCCAAAAAAG ATAGAGATAA ATCTGTAGAT
GCTATCTTAG AATATTTTAT GGATGAAGAA AAACGTAATG AGTTTTTTGT GTATTATAAG
AAGCTGTCTG GTTTGTATGA AATATTATCT CCCGACAAAT TTTTAAAGAA ATATCTACAA
GATTATGATA CCCTTTCAAG GATGTATAAG ATTTTGAAAA ATGCTTATGA AAAAGGTGTA
TCTGTAGATG AGGAATTCAC AGAGAAAACA AAGAAATTAA TTCAAAAGTA TACAAAAAAT
AGTAAAATTA AAGATACATT GGAAGTTTTT GTGATAGATG AATATACTTT AAAGAGGATT
GAAGAAAGTA ATGCTTCAGA CGTTGAAAAG GTTTTTAATT TATACAAGAG TATTGAAAAG
ACTGTTGAAG AAGAAAGCGT AGAATATCCA ATTCTCATTA CAATAGGAGA AAAAGCGGAG
AATTTACTTT TCTTGTACAA AAACAGACAG AAGAGTACAG AAGAAACTTT AAATGGCTTA
AAGAACTTGG TACAAGAAAC AAATGACAAG AAGAAGGCTC AAAAAGAAAG TGGAAAATCA
GCAGCATTTT TTACCCTCAA AGAATTGTTG AAAGATGAAT CGATCGATGA TGCCGAGGAT
ATTGCTGAAG AGTTCGAAAA AAAGAAGGAA ACTTATCCTC TTTGGGATAA AGACGAAGTT
CAAAAAAGAA AAATGAGACA GGAATTTTAC AAGTTATTAG GGCCGAAAGG GCTCAAAGGC
GAAAAAATAA AACAGTTATT CGAAAAATAT CTCTACATTC TAAAAGGTAG GGATGTAAAT
GATTGA
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| Protein sequence | MGLGDEKYSA QDPIIKYVQE ESAEYGSSEG SKVFLNLGWE YVKPDEALRL KGGEKGLIFK
DVFIKQLQKL NPGFMDHLSA EKILKDLERI PPNIQGNLII WEFLKGLKTI FVPNEKRERN
VTFLDTYEID RNIFQVTDEF TFTNGSETIR ADVVFLINGV PFILIETKAP HRTDPLNEAY
KQVKRYHQEA PELLAILQIF GLIDVIRFYY GATWNLSGGS LFEWKDELDQ GYETLIKTFF
DRKRVIKILT DFILFTKQDE ELKKVVLRPH QMKAVDKIIE RAKDPSKQRG LIWHTQGSGK
TYTMIVTAKK IIEDPFFENP TVIMLVDRNE LESQLFSNLK SVGIENVEVV ESKKHLRQLL
KTDKRGLIVS MIHKFDNIPA DLNLRKNIFV LVDEAHRSTG GKLGTFLEGA LPNATYIGFT
GTPIDKTNYG KGTFVTFGKD DPPKGYLDKY SISESIKDGT TVPLYYTFAP NKMMIEKDVL
EKEFLTLAET QGVSDVEELN KVLEKAVKLK NMLKNNDRVQ LISKFVAKHF KEFIEPMGFK
AFLVAVDREA CALYKEELDK HLPPEYSKVV YSQSQNDPPQ MTKYYLSEME EKKVRENFKK
PGELPKILIV TEKLLTGFDA PILYCMYLDK PMRDHVLLQA IARINRPYKK EEKDKKNGLV
VDFVGIFNNL EKALAFDSED IEGVIEDIEL LKEEFAQQME IGKEKYLSIV AKKDRDKSVD
AILEYFMDEE KRNEFFVYYK KLSGLYEILS PDKFLKKYLQ DYDTLSRMYK ILKNAYEKGV
SVDEEFTEKT KKLIQKYTKN SKIKDTLEVF VIDEYTLKRI EESNASDVEK VFNLYKSIEK
TVEEESVEYP ILITIGEKAE NLLFLYKNRQ KSTEETLNGL KNLVQETNDK KKAQKESGKS
AAFFTLKELL KDESIDDAED IAEEFEKKKE TYPLWDKDEV QKRKMRQEFY KLLGPKGLKG
EKIKQLFEKY LYILKGRDVN D
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