Gene Pmob_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1822 
Symbol 
ID5758054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2006306 
End bp2007808 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content35% 
IMG OID641303012 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_001568834 
Protein GI160903253 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCC CTTCAAACAA ACTACTACAA TTTTTAAACG GTAATATAAA AAAGAAAGTA 
ATCAAAAATG AGATATTGAA TATAGCAGAT ATCAAAGACA ACAGTGAAAA CGTTGAAAAA
GACGATATTT TCATCGCTTT CAAAGGTTCC CGCTTCGATG GTCATGATTT TATTCTTTCA
GCATTTGATA AAGGTGCTTC ATTAATAATT GCTCAAGACG AAGAAAAAAT TCCAACAAAT
GATTCTCTGC AATACATAAT CGTAGAAGAT ATTAAAAAGG CTGCTGCTGA TTTATCTCAC
AAATTATTCG ACATCTCTCC AGATGATTTT AAAATACTTG GAGTAACCGG CACTAATGGC
AAATCTACAA CGGTATCTTT AGTTCATCAC ATCTTACAAA AATCAGATAA GGACTCGACG
CTAATAAGTA CCGTAGAAAT TAAAATAAAA GACGAGGTAG TTAAGGAACC ATACAACACC
ACTCCCAGTA TTTTAGAGTT GTCCAAAATA TTAAAAAACA GCAAAGAAAA TAATATTGAA
TTTATTAACA TGGAAGTATC GTCTCATGCG ATCCATCAAA GAAGAATTGA AGGCGTTAAA
TTCGATATCA TATCTTTCAC AAACATCACA AGGGATCATT TGGACTATCA TAAAGATTTT
GAAGAATACA AAAGTATCAA ATTATCCCTG ATGAACTATT TAAAAGATGA AGGAAAAATA
GTAATAAATC TAGACAGATT GAACAAAGAC GACTTCGTAA AAAGTGGAAA AGAAGTTATC
ACCTATGGAT TTAAAAAAAA CGCAGACTTT GTGATAGAAA ATTACGAACA AACGCTTCAA
CAAATGAAAT TCACGATCAA GACAAAGGAA CACAAAAGTT ATGAAATACG ATCCCACTTG
ATAGGGAAAT TCAACGTTTA CAATATAACA AATGCCTTTG TAATAGCAAC CCTATTTGGA
CTAGAACCAG AGAAAATCAT CTATTCCATT TCCACCTTTA AAGGTGTCTC TGGAAGGTTC
CAAATCGTTC CAGGCAGCAA ATCGCTAGGT TTCTTTGCAG TTATCGATTT TGCGCACACC
CCCGATGCAC TCAACGAAGT ATTAAAAACC GCTTCATCAA TAACTGAAGG TAGGATAATC
ACAGTATTTG GGGCTGGAGG AAACGCAGAC AAGGGGAAAC GAAAGTTAAT GGGACAAGTT
GTAAGTGAAC ATTCGGACGT TATAGTTCTC ACCAACGATG ATCCAAAAGA TGAAGACCCT
GACCAAATAA TAGAAGACGT ATCAAAAGGT ATAGACCAAG ATAAACATTT CATCGTTATA
CCCGATAGAG AAACCGCCAT AGATACAGCC CTAAGATTTG CTAACAAAGG GGACATAGTA
ATCATAGCGG GAAGAGGCCA TGAAAAATAT CAACTCTTCG CCAATGGAAA AAAGGTTAAG
TTCAACGATT ACGAAGTAAC AAAAAAACTA ATTGACAAAA TCAAAAGGAG TTCGGGAAGG
TAA
 
Protein sequence
MRIPSNKLLQ FLNGNIKKKV IKNEILNIAD IKDNSENVEK DDIFIAFKGS RFDGHDFILS 
AFDKGASLII AQDEEKIPTN DSLQYIIVED IKKAAADLSH KLFDISPDDF KILGVTGTNG
KSTTVSLVHH ILQKSDKDST LISTVEIKIK DEVVKEPYNT TPSILELSKI LKNSKENNIE
FINMEVSSHA IHQRRIEGVK FDIISFTNIT RDHLDYHKDF EEYKSIKLSL MNYLKDEGKI
VINLDRLNKD DFVKSGKEVI TYGFKKNADF VIENYEQTLQ QMKFTIKTKE HKSYEIRSHL
IGKFNVYNIT NAFVIATLFG LEPEKIIYSI STFKGVSGRF QIVPGSKSLG FFAVIDFAHT
PDALNEVLKT ASSITEGRII TVFGAGGNAD KGKRKLMGQV VSEHSDVIVL TNDDPKDEDP
DQIIEDVSKG IDQDKHFIVI PDRETAIDTA LRFANKGDIV IIAGRGHEKY QLFANGKKVK
FNDYEVTKKL IDKIKRSSGR