Gene Pmob_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1821 
Symbol 
ID5758053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2005014 
End bp2006306 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content33% 
IMG OID641303011 
ProductMur ligase middle domain-containing protein 
Protein accessionYP_001568833 
Protein GI160903252 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0386554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGAAC GTTTAAAATA TAAAGGCCAC AATTTTCAAA TTGACTCTCG AAAAGTGAAT 
GAAGGTGACG TATTTTTATG TTTAAAAGGT GAGAAAACCG ACGGACACCT ATTTATAAAC
GACGCATTGA AAAACGGAGC GTCTTACGTA ATTGTTGAAA AAGATGTTGT TGACTTTCCA
AAAGAAAAAA TAATCAAAGT CAACAGCGTC CTAGAAGAAA TGCTTATCTC TGCTTCAACA
TTGATCAATG AAAACGCCAA ATTAAAGATT GGAATAACCG GATCCACTGG AAAAACCACC
ACGAAAGAAT GCTTGTATTA TTTGTTGTTA GCTTATTTCA AAACTTTTAG AAACGAGATG
AATTTGAATA CGGAAATAGG AATACCCTTA TCGATTTTGA ACAACTATAA CAACGAAGAA
ACCGTCATAC TAGAAGAAGG TCTTAGAAAA AAGGGAGACC TTGAATTTTT ATCAAGATAT
TTTAATTTAG ATGTTGCCAT TATCACGAAC GTAGGGGCTT CACATTTGGA ATTTCTAGAC
TCTTTAGAAA CGGTAGCTGA AGAAAAAATG AAAATAACAA GCAACATGGA TAAAGGAGTT
TTAATAATCA ATGGAGACTA CTCATTATTA AAAGAATTGG CACCGAAACA TCTGAACCGA
CTAACCTTTG GAACAAAAGA TGAAAACGAT GCCGTTTTAA AAAGCTTCGA GTACAATGAA
AACCACACAA CGACCTTTTA CGCTAGAATT CTACAGGAAG ATTTGATGGT AACGCTGAAC
CATTATTGGA GTGAAGGTCA GATATTAGAC TTACTCTCAG GATTGCTGCT TTTGAGATTC
ATCGATTTAC CAGTTGATCC ATACTATTTA TTTAACATCA ACATCCCTCA AGATCGTTTT
CAAACCATAA AACGTGGGAA TCTTTTAATA GTAAACGACT CTTACAACGC ATCCTACGAA
TCTTTTAAAA GTGCTTTTAA CAGCATAAAA AAGTGGAATC TTTCTCCTAA AATTATCATA
ATGGGAGAAA TAAAAGAATT AGGAAAATAC AGCGAAGAAT ACCACATCAA AGTTATAACA
GAAGCCTTAA ATATTTTTGA TCGGATTTAT TTCTACGATC CTCAAGAAAA TTTCACCTAT
CTATCAAATG ATAAAGTTAC CTTCTTTAAA GAGCTAAAAA AAATTGATGA AATAATATCA
AACACCACCA AAGGAGTGAT CTATATAAAA GGATCTAACA CTACTGGAAT AAACAAATAT
CTAAAGGAAA GTGACTTAAT TTGGAAAGAT TGA
 
Protein sequence
MLERLKYKGH NFQIDSRKVN EGDVFLCLKG EKTDGHLFIN DALKNGASYV IVEKDVVDFP 
KEKIIKVNSV LEEMLISAST LINENAKLKI GITGSTGKTT TKECLYYLLL AYFKTFRNEM
NLNTEIGIPL SILNNYNNEE TVILEEGLRK KGDLEFLSRY FNLDVAIITN VGASHLEFLD
SLETVAEEKM KITSNMDKGV LIINGDYSLL KELAPKHLNR LTFGTKDEND AVLKSFEYNE
NHTTTFYARI LQEDLMVTLN HYWSEGQILD LLSGLLLLRF IDLPVDPYYL FNINIPQDRF
QTIKRGNLLI VNDSYNASYE SFKSAFNSIK KWNLSPKIII MGEIKELGKY SEEYHIKVIT
EALNIFDRIY FYDPQENFTY LSNDKVTFFK ELKKIDEIIS NTTKGVIYIK GSNTTGINKY
LKESDLIWKD