Gene Pmob_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1819 
Symbol 
ID5756708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp2002790 
End bp2004085 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content33% 
IMG OID641303009 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_001568831 
Protein GI160903250 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAT GCCTTGTAGG ATACGGAAAA AGTAACAATG AGTTACTGAC AAAGCTTTTA 
AAAAGTAATC ACGAAATCTT TGTTAGCCAA GACAAAGATT TTACTAAAAC CGATGAAATA
TACTTTAAGA AAAACAACAT TCAATATGAA ACCAACCACA ACGACCTTTT AAAAAACTGT
GATTTGGCTA TCGTAAGCCC TGGTATCCCA CCAAACAGTA AGGCTGCTAA AATAATATTT
GAAAACAATA TCGATTACAC TACAGAATTA GAGTATTCAT GGCAGAATAT AAAAAAAGAA
AACAAAAAAG CTGTTTTTAT TGGAATAACA GGAACCGATG GAAAATCAAC CACCACCTCT
TTAATAGGAC ATATATTAAA ATTCGCAGAT CCTTTAACCT TTGTGGGTGG TAATATTGGA
GTTCCCTTAG CAAAAGCGTC AGAAACTCTA AACTACTACG TAGTTGAGGT TAGCTCTTTT
CAAATATTCT GGTCAAAAAC GTTTACTCCT GAAATATCCG TGTTAACGAA CCTGGCACCC
GATCATCTAA ACTGGCATAA AGACTTAAAT GATTACTATC AAACCAAAGC AAAATTATTG
TTAAGAACCC TCAAATCAGG AGGAGTGGCA GTTGTAAACG AAGATGCTGT AAATCTTTTA
AACCTAAAAG ATTATCAAGC AAGTGAAAGG ATTATAACCT TTTCTAAAAA CATGATTGAA
GGCAATTACA TTAAATACAA AGATAAAAAG ATACAAGTCA ACAACAAAAT ATTTGAACTG
GACATCTTCA AAGAAGACAT CTTGGCATCA GCAGTAACGA CGCTAAATCT TGGGATCTCT
GAAAAAATTA TCGAAGAGGC AATAAACTCA TTTAAACCAC TAAAGTATAG GTTGGAACTG
ATAAAAAGCA AAAACGGAGT CAATTATTAC AACGATTCAA AAGCAACCAA CGTTCACTCC
GCATACAACG CTTATAAAAG TTTCAGAGGA ATGCATTATA TAGCAATCCT AAGTGGAATC
CCAAAAAATG AAGACTTAAC ACCATTAATC GAAGAACTTA AAACCTACGC CAAAGCTGTA
ATAGTATTCG GAGAAATGGA AAAAGAAGTC AAAAAATACC CCTTGAATTC TAAATTTATC
TTCAAAAATA ATTTAGAAGA AGTATTCTTA TACCTAAGTG AAATATGTGA AGTTGGAGAC
AATGTGGTAT TTTCACCAGC TGGCGCAAGT TTTGATAAAT ACAAAAATTA TGAAGAAAGA
GGAGAACATT TCAATTTATT GGTCGAAAAA TCGTAA
 
Protein sequence
MKICLVGYGK SNNELLTKLL KSNHEIFVSQ DKDFTKTDEI YFKKNNIQYE TNHNDLLKNC 
DLAIVSPGIP PNSKAAKIIF ENNIDYTTEL EYSWQNIKKE NKKAVFIGIT GTDGKSTTTS
LIGHILKFAD PLTFVGGNIG VPLAKASETL NYYVVEVSSF QIFWSKTFTP EISVLTNLAP
DHLNWHKDLN DYYQTKAKLL LRTLKSGGVA VVNEDAVNLL NLKDYQASER IITFSKNMIE
GNYIKYKDKK IQVNNKIFEL DIFKEDILAS AVTTLNLGIS EKIIEEAINS FKPLKYRLEL
IKSKNGVNYY NDSKATNVHS AYNAYKSFRG MHYIAILSGI PKNEDLTPLI EELKTYAKAV
IVFGEMEKEV KKYPLNSKFI FKNNLEEVFL YLSEICEVGD NVVFSPAGAS FDKYKNYEER
GEHFNLLVEK S