Gene Pmob_1801 details

Gene Information

• Locus tag: Pmob_1801
• ID: 5757276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: -
• Start bp: 1977940
• End bp: 1979799
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641302990
• Product: polysaccharide biosynthesis protein CapD
• Protein accession: YP_001568813
• Protein GI: 160903232
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1086] Predicted nucleoside-diphosphate sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACATT TGTCTAAAAG ATCTTTTAGA TTGATGATAA TTGACTATAT TTTGTTTTTC 
CTTGCTTACA TTGTTGCAAT GTTCATAAGG TTTCAATTTG ACTTTGTGGA GATGAGAAAG 
TACATCTCCC CCATCTTTTT CTTTCCTTTG ATTATGGTAA TTGTTTTTTA TTACTCTGGA 
ATATATAGAT ATATTTGGAG ATTTGCCACT CTTAACGAAT TAAGACCTGT ATTTAATAGT 
GGTTTCATAG GTTTCCTTAT CAACTTTTTT ATTTTTGAGT TTGTAAGAAG ATATATAAGC 
GATATTTTTA CACTTCCTTT CAGCGTGGCG GCGACTGCGT CGGTGGTTGG AGTAGTCTTT 
GTTTCAGCTA GTAGGATATA TTGGTTTTCA AGACATTCTC GAAATTATAA AAAGCGGTTA 
AACGGAATTA AAAATATTCT TATAATAGGA GCAGGCGATG CAGGAACAGA ATTGTTGGGG 
GAATACGAAA GGCATCCAGA AGAGGGATCA GTTGTAGGCT TTTTGGATGA TGATCCAGAA 
AAGATAGGAA GAAACATTCG AGGCTATCCT GTACTGGGGA AAATAAACCA AGTTATGGAT 
TTTGTTGAAA AATACAATGT TGAAGAGGTT ATAATAGCTA TTCCTAGCGC TTCATCAGAT 
CAGATAAAAA AAATCATAGA TTATGTTGAT ACATCGAAGG TTAGATTAAA AACTTTGCCA 
GGAATCTTGG AAATTTTAGA TAACAAGTTA TCACTTGGCT TTCTACGAGA GGTCGATATT 
TCCGATTTAT TAGGTAGAAA GGAAGTTAGC GTTGATTTAA AAGAGATAAA AGATTACATA 
AAAGGCAAAA AAATACTGGT TACTGGTGCA GGGGGAAGTA TAGGTTCTGA AATATGTAGA 
CAGGTTTTAC CAATGGGTCC CAAAGCTCTT TTCTTGCTTG GAAAAGGTGA AAACAGTATT 
TTTGAAATAT CGAATGAACT GAAAGACAAA TTTTCAGATG CCTTTATAGA AGAAATTATC 
GCAGATGTAT CCGATGAAAA TAGAATGAGG TATTTATTTT CAAAATATAG ATTTGATGTT 
GTTTTTCATG CTGCTGCTCA TAAACATGTA CCCCTCATGC AAAAAAATCC AACAGAAGCC 
TTCAGGGTCA ACACAATTGG GACTTACACT GTTGCAAAAC TTTCAGGGGA ATACAATGTA 
GAAAGATTCG TTTTTATTTC CACCGACAAA GCCATCAAAC CAACATCCAT TATGGGTGCT 
TCAAAGAGAC TTGGGGAAAT TATAGTAAAG ACAATGTCTA ATTTTTATCA AACAAAGTAT 
GGAATTGTAA GGTTCGGGAA CGTTTTGGGA AGTAGAGGGA GTGTAATTCC AATTTTCAAA 
GAACAGATAC AAAAGGGTGG TCCCGTTACT GTCACACATC CCAATATGAA AAGGTATTTC 
ATGACTATTC CGGAGGCTGT CTCTTTAGTA TTACAATGTG GACAGTTCGC TCAAAAGGCT 
GAAATATTTG TTTTAGAAAT GGGAGCGCCT GTCAATATTG ATCGATTAGC AAGGGATTTG 
ATCAGACTTT CCGGGTATAT CCCTGATCAA GACATTAAAA TAGTTTATAC AGGCATCAGG 
CCTGGTGAGA AATTATACGA AGAAATATTT TTGGAAGATG AAGATTACGA AAAAACTAGA 
AACAGACGAA TCTTTATTTC AAAATCCAAC AATCACGAAA TAAATAAAGA GAAGCTAAAT 
GAATTGATAG ATCGAATAAA TATAATGATA AAAAATCATG ATTACAACAG TGTTATTGAG 
ATAATAAAAG ATTACATACC AGATTCAAAT ATATCAAAGA TCAGCGAAGA AACTCAATGA 

 

Protein sequence

MKHLSKRSFR LMIIDYILFF LAYIVAMFIR FQFDFVEMRK YISPIFFFPL IMVIVFYYSG 
IYRYIWRFAT LNELRPVFNS GFIGFLINFF IFEFVRRYIS DIFTLPFSVA ATASVVGVVF 
VSASRIYWFS RHSRNYKKRL NGIKNILIIG AGDAGTELLG EYERHPEEGS VVGFLDDDPE 
KIGRNIRGYP VLGKINQVMD FVEKYNVEEV IIAIPSASSD QIKKIIDYVD TSKVRLKTLP 
GILEILDNKL SLGFLREVDI SDLLGRKEVS VDLKEIKDYI KGKKILVTGA GGSIGSEICR 
QVLPMGPKAL FLLGKGENSI FEISNELKDK FSDAFIEEII ADVSDENRMR YLFSKYRFDV 
VFHAAAHKHV PLMQKNPTEA FRVNTIGTYT VAKLSGEYNV ERFVFISTDK AIKPTSIMGA 
SKRLGEIIVK TMSNFYQTKY GIVRFGNVLG SRGSVIPIFK EQIQKGGPVT VTHPNMKRYF 
MTIPEAVSLV LQCGQFAQKA EIFVLEMGAP VNIDRLARDL IRLSGYIPDQ DIKIVYTGIR 
PGEKLYEEIF LEDEDYEKTR NRRIFISKSN NHEINKEKLN ELIDRINIMI KNHDYNSVIE 
IIKDYIPDSN ISKISEETQ