| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1795 |
|---|
| Symbol | |
|---|
| ID | 5756597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1970932 |
|---|
| End bp | 1972452 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641302984 |
|---|
| Product | glutamate synthase, NADH/NADPH, small subunit |
|---|
| Protein accession | YP_001568807 |
|---|
| Protein GI | 160903226 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATC CCCAAGGATT TCTAAAGTAT GAAAGAAAAA CCCCTGAAGA AAGACCCTCA
AAAATAAGAA TAAATGATTG GGAAGAATTA TATATAGAAA TGGAAAAAGA TGAACTTCGA
ATGCAAGCAG CAAGATGCAT GAACTGCGGC ACACCGTTTT GTCATTCTGG CATATTGATA
AATAATATGG TCTCGGGGTG CCCTTTGAAT AATTTGATTC CAGAATGGAA CGATTTAGTA
TATAGAAACC TTTGGAAAGA AGCTTACGAA AGGTTGATCG AAACAAACAG TTTCCCAGAA
TTCACGGGAA GGGTTTGTCC TGCTCCATGC GAAAAAGCTT GTGTAAACAA TTTGGTAAAG
GATCCGGTTT CCATTAAAAG TATTGAATAT TATATTATAG AAGAAGCATT CAAAAATGGT
TGGGTAGAAG AGGATAAGCC ATCTTACTCC ACTGGTAAAA AGGTGGCTGT TGTAGGTTCT
GGACCGGCAG GGTTATCATG TGCTTGGGAG TTAAAAAGAT ATGGTCATGA AGTTACAGTT
TTTGAAAAGT ATGAATATCC GGGGGGCTTA TTGACTTACG GTATACCAAA TATGAAATTG
GACAAAAAGA TTGTAAAAAG ACGTATAGAA TTGATGAAAA AATCTGGCAT ACAATTCAAA
ACTAATATAG ACGTTGGTAA AGATTATCCT GCTCAAAAGC TAAAAGAAGA GTTTGATAGC
GTTGTATTAT GTGGAGGAAC CGCTAAAGCG AGAGATTTAA ACGTAGAGGG AAGAAACCTA
AAAGGGATAT ACTTTGCCAC AGAATTTTTG AAGAGTGCAA ACGAGAGAAT ACTGTCTCAA
TTTATAAAAA GTGAAAAAGA TATTGAGGAG ATCTCTGCTA AGGGTAAGAA CGTTATCGTA
ATCGGTGGAG GAGATACGGG AACGGATTGT GTGGGAGTTA GTTTAAGACA GGGTTGTAAA
AGTGTTGTAC AGTTTGAAAT TATGGACAAA CCTCCACTTT TAAGGAGACA AAACAATCCT
TGGCCAGAAT GGCCCAAAGT TTTAACTGTT GATTATGCTC AGGAAGAATA TGCAGAACTA
TTCGGTAAAG ATCCGAGATT GTACAACATT TCAACTAAAA GATTTGTTGG AGATGCAAAA
GGTAACGTTA AAGAGGTCCA TACCGTTGAA GTAGAATGGA AACAGGATAA AACAGGAAAA
TTGTTTCCAA AAGAAATCGA TGGAACAGAA AAGGTATGGA AAGCAGATTT AGTTCTGTTA
GCCTTGGGAT TCTTAGGCCC CGAAAAGTAT TTAATTGAGC AGTTAAATGT AGAAACAGAT
AAAAGATCAA ACGTTAAAAC GGAAGAAGGA AAATACTCGA CAAATGTGGA AGGGATTTTT
TCAGCTGGAG ATATGAGAAG GGGACAAAGT TTGGTAGTAT GGGCAATAAA TGAAGGGAAA
CAAGCAGCAA AAGAATGTAA TGAATACTTA ATTTCTTCCA ATAATAACAA TAATAAACAG
CGTCGGCTCA AAACGCTGTA G
|
|---|
| Protein sequence | MGDPQGFLKY ERKTPEERPS KIRINDWEEL YIEMEKDELR MQAARCMNCG TPFCHSGILI
NNMVSGCPLN NLIPEWNDLV YRNLWKEAYE RLIETNSFPE FTGRVCPAPC EKACVNNLVK
DPVSIKSIEY YIIEEAFKNG WVEEDKPSYS TGKKVAVVGS GPAGLSCAWE LKRYGHEVTV
FEKYEYPGGL LTYGIPNMKL DKKIVKRRIE LMKKSGIQFK TNIDVGKDYP AQKLKEEFDS
VVLCGGTAKA RDLNVEGRNL KGIYFATEFL KSANERILSQ FIKSEKDIEE ISAKGKNVIV
IGGGDTGTDC VGVSLRQGCK SVVQFEIMDK PPLLRRQNNP WPEWPKVLTV DYAQEEYAEL
FGKDPRLYNI STKRFVGDAK GNVKEVHTVE VEWKQDKTGK LFPKEIDGTE KVWKADLVLL
ALGFLGPEKY LIEQLNVETD KRSNVKTEEG KYSTNVEGIF SAGDMRRGQS LVVWAINEGK
QAAKECNEYL ISSNNNNNKQ RRLKTL
|
|---|
| |