Gene Pmob_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1782 
Symbol 
ID5757939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1952475 
End bp1953482 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content38% 
IMG OID641302971 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001568794 
Protein GI160903213 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00282517 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCTGA GAAATTATAT TATTGTGAGG ATCTTGTTGG CTATTCCCAT GCTTTTTGTT 
CTCCTAGTAG TAATATTTTT TGTTATTAGG ATAATTCCCG GAGATCCCGT TGCAGCAATG
TTAGGTGGAA GAGCCTCTCA AGAAGTTATT GAAGCCAGGA GAGCAGAATT AGGACTTAAC
GATCCCATAT TGGTTCAATT TTTTAAATAC GTAGGGGGAC TGTTCAAAGG TGACTTGGGA
ACTTCAACAA TGACGGGAAG GCCTGTGCTT GATGAGATCT TAGAAAGATT TCCTGCAACA
CTTGAATTAA CGATTTTTGC GTTTATTGTA GCAGTAGTTA TAGGGGTCTT TTGGGGTTCA
AAAGCTGCAC AAAAAAGAGA CAAACCCGTA GATATAATTG CCAGAGGATT TTCGATGCTT
ATGTATGCTG TACCGGTATT TTGGTTTGGT TTGATGATGC AATTCATTTT TGGAATGCAG
TTGAAATGGC TACCTATTGC CGGAAGGATC GGCGCTACAG TGCAATTCGA AGAAATTACA
GGTTTGTTTT TACTGGATTC CCTTTTAAGA GGTAATTGGA CTGCTTTTTG GGATGTTCTG
CAACATTTGT TGTTACCTGG TATTACTCTT GGCCTTGTTA TCTCAAGTAT TTTTTTAAGA
ATGGTGAGGA ATAATACAAT TCTAACGTTA ACCTCTGATT ATGTTAAATC TGCTAAAGCA
AGGGGTATAC CTGAAAATAG AATATTATAC AGGCATGCTT TAAGGAACGC TTTAGTTCCT
ATTTTAACAG TAATGGGATT ACAGCTCGCA CTATTGATGG CTGGAGCTGT TTTAACTGAA
ACAACTTTTT CTTGGCCAGG GATAGGGAGT TACCTCATCA TGAAAATCAG ATACAGAGAT
TTTCCCGCCA TTCAAGGAAC GATAGTTTTT TTCGCAATTT TCGTAATTAT AATTAACATC
ATAGTAGAAA TTATCAACGC GTTAATAGAC CCAAGAGTAA GGTACTGA
 
Protein sequence
MSLRNYIIVR ILLAIPMLFV LLVVIFFVIR IIPGDPVAAM LGGRASQEVI EARRAELGLN 
DPILVQFFKY VGGLFKGDLG TSTMTGRPVL DEILERFPAT LELTIFAFIV AVVIGVFWGS
KAAQKRDKPV DIIARGFSML MYAVPVFWFG LMMQFIFGMQ LKWLPIAGRI GATVQFEEIT
GLFLLDSLLR GNWTAFWDVL QHLLLPGITL GLVISSIFLR MVRNNTILTL TSDYVKSAKA
RGIPENRILY RHALRNALVP ILTVMGLQLA LLMAGAVLTE TTFSWPGIGS YLIMKIRYRD
FPAIQGTIVF FAIFVIIINI IVEIINALID PRVRY