Gene Pmob_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1753 
Symbol 
ID5757751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1918919 
End bp1920376 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content41% 
IMG OID641302945 
Productputative transcriptional regulator 
Protein accessionYP_001568768 
Protein GI160903187 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCTG AAAAGAGTTT AAGGTTCATG CTATCCCATC CGGAGGGGCA ATTTGTGGAG 
CTGAAGCGAT CTGTTTCTAG TTCGGTTGAT CGTGAGATAG TAGCATTCGC TAATTCAGGT
GGCGGCCACA TCATAGTTGG AGCCGATAAT AATGGCAAAG TTGTTGGTAT ATCTGATGTT
AATGATCAAA TTTCAAGGTT GGAGAGTATA GCCAGAAACT GTGATCCTCC AATACCTTTG
AAGATCAGTT CATATACACT AGATGGAAAA GAAATCCTTG AAGTTGAAGT TCCAGATGGT
GAGGATAAGC CTTATTCTTG CGCTTCAGGG TTCTTTCTTA GAAGCGGCAC TAGCACCCAG
AAGATGAAAA GAGACGAAAT TGTGGAGTTT CTCTACTCAG TGGGACAGGT GAGGTGGGAT
GAGAAATCAT GTAAAGATTT TCGTTATCCG GATGATTTTG ACGAGGAGGC ATTCAGGTAC
TTTCTGGATA GCGCAAAAAT AACCTCGGCC GGAATGTCAA GTGAAGACTT ACTGATAAAT
ATTGGTGTTG CAAGGAAAAC TAGAGAACGA TTAATCTTCA ATAATGCAGG GGTTTTATTC
TTTGCCAAAG AGCCGATACG ATTTCTGAGA CACAACATTG TAGATTGTAT ACTTCTTGCA
GGTACTGATA AGTTGGAGAT CCTCGATAGA AAAGAGTTGA AAGGAAATCT CATGGAAAAT
GTGAAGCAGG CAATGATATT CCTAAAAATG CACTTGCCTT TAAGATATGA GATTAAGGGA
TTAAAAAGGA AAGAATTTTT AGAAATTCCA GAGGAAGCAC TACGCGAAGC CATCCTTAAC
GCCATTATCC ATAGAGATTA CCATTTTGAT ACTGCGTGGA TAACTGTAGA GATATACAGG
GATAGGGTAG AGATTTCGGA TCCCGGGGGG CTGCCACCGG GGATGCACCC CGAGGACCTC
GGTAAGAAGA GTGTCCACAG AAACAAGATA ATCGCTGACC TTTTTCACAG AATGGGTGAA
GTAGAGAAAG CAGGCTCAGG TATCAATCGT ATAAGGGATT TGTTGGCGAC CAGTGGGTTG
AGCGAGCCAG GGTTTGAGTT TAAATCATTC TTCACAATTA TATTCGATAG GAAGCCACAA
GTTATAACAG AACTTACAGA TAGTGAAATG CTCTTGAAAC GTGCTTATGA TGGAGTAAAT
GAGGGAGTAG GTGATGGAGT AAATGAGGGA GTAAAATTGA GATTATCAAA AGAGTTGATC
GAAATCCACG CACGGAAATC TATCACCCGC AGAGATATAG AAAAGCTCTT TAATGTATCA
ACAGCCACTG CTGAAAGAGA TATAGCAATG CTAAAAGATG TAAATCTTAT AAGGTTCGAG
GGCGCACCCA AAACAGGAAA ATATGTTCTG ACAGAGAAGG GAAAGAAGAT GATAGAGGAG
GCGGGGTATG GGTTCTGA
 
Protein sequence
MDSEKSLRFM LSHPEGQFVE LKRSVSSSVD REIVAFANSG GGHIIVGADN NGKVVGISDV 
NDQISRLESI ARNCDPPIPL KISSYTLDGK EILEVEVPDG EDKPYSCASG FFLRSGTSTQ
KMKRDEIVEF LYSVGQVRWD EKSCKDFRYP DDFDEEAFRY FLDSAKITSA GMSSEDLLIN
IGVARKTRER LIFNNAGVLF FAKEPIRFLR HNIVDCILLA GTDKLEILDR KELKGNLMEN
VKQAMIFLKM HLPLRYEIKG LKRKEFLEIP EEALREAILN AIIHRDYHFD TAWITVEIYR
DRVEISDPGG LPPGMHPEDL GKKSVHRNKI IADLFHRMGE VEKAGSGINR IRDLLATSGL
SEPGFEFKSF FTIIFDRKPQ VITELTDSEM LLKRAYDGVN EGVGDGVNEG VKLRLSKELI
EIHARKSITR RDIEKLFNVS TATAERDIAM LKDVNLIRFE GAPKTGKYVL TEKGKKMIEE
AGYGF